The training of high-dimensional regression models on comparably sparse data is an important yet complicated topic, especially when there are many more model parameters than observations in the data. From a Bayesian perspective, inference in such cases can be achieved with the help of shrinkage prior distributions, at least for generalized linear models. However, real-world data usually possess multilevel structures, such as repeated measurements or natural groupings of individuals, which existing shrinkage priors are not built to deal with. We generalize and extend one of these priors, the R2D2 prior by Zhang et al. (2020), to linear multilevel models leading to what we call the R2D2M2 prior. The proposed prior enables both local and global shrinkage of the model parameters. It comes with interpretable hyperparameters, which we show to be intrinsically related to vital properties of the prior, such as rates of concentration around the origin, tail behavior, and amount of shrinkage the prior exerts. We offer guidelines on how to select the prior's hyperparameters by deriving shrinkage factors and measuring the effective number of non-zero model coefficients. Hence, the user can readily evaluate and interpret the amount of shrinkage implied by a specific choice of hyperparameters. Finally, we perform extensive experiments on simulated and real data, showing that our inference procedure for the prior is well calibrated, has desirable global and local regularization properties and enables the reliable and interpretable estimation of much more complex Bayesian multilevel models than was previously possible.
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ACM/IEEE第23屆模型驅動工程語言和系統國際會議，是模型驅動軟件和系統工程的首要會議系列，由ACM-SIGSOFT和IEEE-TCSE支持組織。自1998年以來，模型涵蓋了建模的各個方面，從語言和方法到工具和應用程序。模特的參加者來自不同的背景，包括研究人員、學者、工程師和工業專業人士。MODELS 2019是一個論壇，參與者可以圍繞建模和模型驅動的軟件和系統交流前沿研究成果和創新實踐經驗。今年的版本將為建模社區提供進一步推進建模基礎的機會，并在網絡物理系統、嵌入式系統、社會技術系統、云計算、大數據、機器學習、安全、開源等新興領域提出建模的創新應用以及可持續性。
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The aim of this note is to state a couple of general results about the properties of the penalized maximum likelihood estimators (pMLE) and of the posterior distribution for parametric models in a non-asymptotic setup and for possibly large or even infinite parameter dimension. We consider a special class of stochastically linear smooth (SLS) models satisfying two major conditions: the stochastic component of the log-likelihood is linear in the model parameter, while the expected log-likelihood is a smooth function. The main results simplify a lot if the expected log-likelihood is concave. For the pMLE, we establish a number of finite sample bounds about its concentration and large deviations as well as the Fisher and Wilks expansion. The later results extend the classical asymptotic Fisher and Wilks Theorems about the MLE to the non-asymptotic setup with large parameter dimension which can depend on the sample size. For the posterior distribution, our main result states a Gaussian approximation of the posterior which can be viewed as a finite sample analog of the prominent Bernstein--von Mises Theorem. In all bounds, the remainder is given explicitly and can be evaluated in terms of the effective sample size and effective parameter dimension. The results are dimension and coordinate free. In spite of generality, all the presented bounds are nearly sharp and the classical asymptotic results can be obtained as simple corollaries. Interesting cases of logit regression and of estimation of a log-density with smooth or truncation priors are used to specify the results and to explain the main notions.
Compared to mean regression and quantile regression, the literature on modal regression is very sparse. We propose a unified framework for Bayesian modal regression based on a family of unimodal distributions indexed by the mode along with other parameters that allow for flexible shapes and tail behaviors. Following prior elicitation, we carry out regression analysis of simulated data and datasets from several real-life applications. Besides drawing inference for covariate effects that are easy to interpret, we consider prediction and model selection under the proposed Bayesian modal regression framework. Evidence from these analyses suggest that the proposed inference procedures are very robust to outliers, enabling one to discover interesting covariate effects missed by mean or median regression, and to construct much tighter prediction intervals than those from mean or median regression. Computer programs for implementing the proposed Bayesian modal regression are available at //github.com/rh8liuqy/Bayesian_modal_regression.
High-dimensional data can often display heterogeneity due to heteroscedastic variance or inhomogeneous covariate effects. Penalized quantile and expectile regression methods offer useful tools to detect heteroscedasticity in high-dimensional data. The former is computationally challenging due to the non-smooth nature of the check loss, and the latter is sensitive to heavy-tailed error distributions. In this paper, we propose and study (penalized) robust expectile regression (retire), with a focus on iteratively reweighted $\ell_1$-penalization which reduces the estimation bias from $\ell_1$-penalization and leads to oracle properties. Theoretically, we establish the statistical properties of the retire estimator under two regimes: (i) low-dimensional regime in which $d \ll n$; (ii) high-dimensional regime in which $s\ll n\ll d$ with $s$ denoting the number of significant predictors. In the high-dimensional setting, we carefully characterize the solution path of the iteratively reweighted $\ell_1$-penalized retire estimation, adapted from the local linear approximation algorithm for folded-concave regularization. Under a mild minimum signal strength condition, we show that after as many as $\log(\log d)$ iterations the final iterate enjoys the oracle convergence rate. At each iteration, the weighted $\ell_1$-penalized convex program can be efficiently solved by a semismooth Newton coordinate descent algorithm. Numerical studies demonstrate the competitive performance of the proposed procedure compared with either non-robust or quantile regression based alternatives.
We propose to use L\'evy {\alpha}-stable distributions for constructing priors for Bayesian inverse problems. The construction is based on Markov fields with stable-distributed increments. Special cases include the Cauchy and Gaussian distributions, with stability indices {\alpha} = 1, and {\alpha} = 2, respectively. Our target is to show that these priors provide a rich class of priors for modelling rough features. The main technical issue is that the {\alpha}-stable probability density functions do not have closed-form expressions in general, and this limits their applicability. For practical purposes, we need to approximate probability density functions through numerical integration or series expansions. Current available approximation methods are either too time-consuming or do not function within the range of stability and radius arguments needed in Bayesian inversion. To address the issue, we propose a new hybrid approximation method for symmetric univariate and bivariate {\alpha}-stable distributions, which is both fast to evaluate, and accurate enough from a practical viewpoint. Then we use approximation method in the numerical implementation of {\alpha}-stable random field priors. We demonstrate the applicability of the constructed priors on selected Bayesian inverse problems which include the deconvolution problem, and the inversion of a function governed by an elliptic partial differential equation. We also demonstrate hierarchical {\alpha}-stable priors in the one-dimensional deconvolution problem. We employ maximum-a-posterior-based estimation at all the numerical examples. To that end, we exploit the limited-memory BFGS and its bounded variant for the estimator.
Simulating quantum channels is a fundamental primitive in quantum computing, since quantum channels define general (trace-preserving) quantum operations. An arbitrary quantum channel cannot be exactly simulated using a finite-dimensional programmable quantum processor, making it important to develop optimal approximate simulation techniques. In this paper, we study the challenging setting in which the channel to be simulated varies adversarially with time. We propose the use of matrix exponentiated gradient descent (MEGD), an online convex optimization method, and analytically show that it achieves a sublinear regret in time. Through experiments, we validate the main results for time-varying dephasing channels using a programmable generalized teleportation processor.
Modern network datasets are often composed of multiple layers, either as different views, time-varying observations, or independent sample units, resulting in collections of networks over the same set of vertices but with potentially different connectivity patterns on each network. These data require models and methods that are flexible enough to capture local and global differences across the networks, while at the same time being parsimonious and tractable to yield computationally efficient and theoretically sound solutions that are capable of aggregating information across the networks. This paper considers the multilayer degree-corrected stochastic blockmodel, where a collection of networks share the same community structure, but degree-corrections and block connection probability matrices are permitted to be different. We establish the identifiability of this model and propose a spectral clustering algorithm for community detection in this setting. Our theoretical results demonstrate that the misclustering error rate of the algorithm improves exponentially with multiple network realizations, even in the presence of significant layer heterogeneity with respect to degree corrections, signal strength, and spectral properties of the block connection probability matrices. Simulation studies show that this approach improves on existing multilayer community detection methods in this challenging regime. Furthermore, in a case study of US airport data through January 2016 -- September 2021, we find that this methodology identifies meaningful community structure and trends in airport popularity influenced by pandemic impacts on travel.
The goal of the group testing problem is to identify a set of defective items within a larger set of items, using suitably-designed tests whose outcomes indicate whether any defective item is present. In this paper, we study how the number of tests can be significantly decreased by leveraging the structural dependencies between the items, i.e., by incorporating prior information. To do so, we pursue two different perspectives: (i) As a generalization of the uniform combinatorial prior, we consider the case that the defective set is uniform over a \emph{subset} of all possible sets of a given size, and study how this impacts the information-theoretic limits on the number of tests for approximate recovery; (ii) As a generalization of the i.i.d.~prior, we introduce a new class of priors based on the Ising model, where the associated graph represents interactions between items. We show that this naturally leads to an Integer Quadratic Program decoder, which can be converted to an Integer Linear Program and/or relaxed to a non-integer variant for improved computational complexity, while maintaining strong empirical recovery performance.
This article develops a convex description of a classical or quantum learner's or agent's state of knowledge about its environment, presented as a convex subset of a commutative R-algebra. With caveats, this leads to a generalization of certain semidefinite programs in quantum information (such as those describing the universal query algorithm dual to the quantum adversary bound, related to optimal learning or control of the environment) to the classical and faulty-quantum setting, which would not be possible with a naive description via joint probability distributions over environment and internal memory. More philosophically, it also makes an interpretation of the set of reduced density matrices as "states of knowledge" of an observer of its environment, related to these techniques, more explicit. As another example, I describe and solve a formal differential equation of states of knowledge in that algebra, where an agent obtains experimental data in a Poissonian process, and its state of knowledge evolves as an exponential power series. However, this framework currently lacks impressive applications, and I post it in part to solicit feedback and collaboration on those. In particular, it may be possible to develop it into a new framework for the design of experiments, e.g. the problem of finding maximally informative questions to ask human labelers or the environment in machine-learning problems. The parts of the article not related to quantum information don't assume knowledge of it.
In this work we connect two notions: That of the nonparametric mode of a probability measure, defined by asymptotic small ball probabilities, and that of the Onsager--Machlup functional, a generalized density also defined via asymptotic small ball probabilities. We show that in a separable Hilbert space setting and under mild conditions on the likelihood, the modes of a Bayesian posterior distribution based upon a Gaussian prior agree with the minimizers of its Onsager--Machlup functional. We apply this result to inverse problems and derive conditions on the forward mapping under which this variational characterization of posterior modes holds. Our results show rigorously that in the limit case of infinite-dimensional data corrupted by additive Gaussian or Laplacian noise, nonparametric MAP estimation is equivalent to Tikhonov--Phillips regularization. In comparison with the work of Dashti, Law, Stuart, and Voss (2013), the assumptions on the likelihood are relaxed so that they cover in particular the important case of Gaussian process noise. We illustrate our results by applying them to a severely ill-posed linear problem with Laplacian noise, where we express the MAP estimator analytically and study its rate of convergence.
Linear mixed models (LMMs) are suitable for clustered data and are common in biometrics, medicine, survey statistics and many other fields. In those applications it is essential to carry out a valid inference after selecting a subset of the available variables. We construct confidence sets for the fixed effects in Gaussian LMMs that are based on Lasso-type estimators. Aside from providing confidence regions, this also allows to quantify the joint uncertainty of both variable selection and parameter estimation in the procedure. To show that the resulting confidence sets for the fixed effects are uniformly valid over the parameter spaces of both the regression coefficients and the covariance parameters, we also prove the novel result on uniform Cramer consistency of the restricted maximum likelihood (REML) estimators of the covariance parameters. The superiority of the constructed confidence sets to naive post-selection procedures is validated in simulations and illustrated with a study of the acid neutralization capacity of lakes in the United States.
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