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Data augmentation (DA) has been widely leveraged in computer vision to alleviate the data shortage, whereas the DA in medical image analysis (MIA) faces multiple challenges. The prevalent DA approaches in MIA encompass conventional DA, synthetic DA, and automatic DA. However, utilizing these approaches poses various challenges such as experience-driven design and intensive computation cost. Here, we propose an efficient and effective automatic DA method termed MedAugment. We propose a pixel augmentation space and spatial augmentation space and exclude the operations that can break medical details and features, such as severe color distortions or structural alterations that can compromise image diagnostic value. Besides, we propose a novel sampling strategy by sampling a limited number of operations from the two spaces. Moreover, we present a hyperparameter mapping relationship to produce a rational augmentation level and make the MedAugment fully controllable using a single hyperparameter. These configurations settle the differences between natural and medical images, such as high sensitivity to certain attributes such as brightness and posterize. Extensive experimental results on four classification and four segmentation datasets demonstrate the superiority of MedAugment. Compared with existing approaches, the proposed MedAugment serves as a more suitable yet general processing pipeline for medical images without producing color distortions or structural alterations and involving negligible computational overhead. We emphasize that our method can serve as a plugin for arbitrary projects without any extra training stage, thereby holding the potential to make a valuable contribution to the medical field, particularly for medical experts without a solid foundation in deep learning. Code is available at //github.com/NUS-Tim/MedAugment.

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Explanation:醫(yi)學圖像分(fen)析(xi)。 Publisher:Elsevier。 SIT:

Contrastive Language-Image Pre-training (CLIP) has been widely studied and applied in numerous applications. However, the emphasis on brief summary texts during pre-training prevents CLIP from understanding long descriptions. This issue is particularly acute regarding videos given that videos often contain abundant detailed contents. In this paper, we propose the VideoCLIP-XL (eXtra Length) model, which aims to unleash the long-description understanding capability of video CLIP models. Firstly, we establish an automatic data collection system and gather a large-scale VILD pre-training dataset with VIdeo and Long-Description pairs. Then, we propose Text-similarity-guided Primary Component Matching (TPCM) to better learn the distribution of feature space while expanding the long description capability. We also introduce two new tasks namely Detail-aware Description Ranking (DDR) and Hallucination-aware Description Ranking (HDR) for further understanding improvement. Finally, we construct a Long Video Description Ranking (LVDR) benchmark for evaluating the long-description capability more comprehensively. Extensive experimental results on widely-used text-video retrieval benchmarks with both short and long descriptions and our LVDR benchmark can fully demonstrate the effectiveness of our method.

While retrieval augmented generation (RAG) has been shown to enhance factuality of large language model (LLM) outputs, LLMs still suffer from hallucination, generating incorrect or irrelevant information. One common detection strategy involves prompting the LLM again to assess whether its response is grounded in the retrieved evidence, but this approach is costly. Alternatively, lightweight natural language inference (NLI) models for efficient grounding verification can be used at inference time. While existing pre-trained NLI models offer potential solutions, their performance remains subpar compared to larger models on realistic RAG inputs. RAG inputs are more complex than most datasets used for training NLI models and have characteristics specific to the underlying knowledge base, requiring adaptation of the NLI models to a specific target domain. Additionally, the lack of labeled instances in the target domain makes supervised domain adaptation, e.g., through fine-tuning, infeasible. To address these challenges, we introduce Automatic Generative Domain Adaptation (Auto-GDA). Our framework enables unsupervised domain adaptation through synthetic data generation. Unlike previous methods that rely on handcrafted filtering and augmentation strategies, Auto-GDA employs an iterative process to continuously improve the quality of generated samples using weak labels from less efficient teacher models and discrete optimization to select the most promising augmented samples. Experimental results demonstrate the effectiveness of our approach, with models fine-tuned on synthetic data using Auto-GDA often surpassing the performance of the teacher model and reaching the performance level of LLMs at 10 % of their computational cost.

Semi-supervised medical image segmentation (SSMIS) has been demonstrated the potential to mitigate the issue of limited medical labeled data. However, confirmation and cognitive biases may affect the prevalent teacher-student based SSMIS methods due to erroneous pseudo-labels. To tackle this challenge, we improve the mean teacher approach and propose the Students Discrepancy-Informed Correction Learning (SDCL) framework that includes two students and one non-trainable teacher, which utilizes the segmentation difference between the two students to guide the self-correcting learning. The essence of SDCL is to identify the areas of segmentation discrepancy as the potential bias areas, and then encourage the model to review the correct cognition and rectify their own biases in these areas. To facilitate the bias correction learning with continuous review and rectification, two correction loss functions are employed to minimize the correct segmentation voxel distance and maximize the erroneous segmentation voxel entropy. We conducted experiments on three public medical image datasets: two 3D datasets (CT and MRI) and one 2D dataset (MRI). The results show that our SDCL surpasses the current State-of-the-Art (SOTA) methods by 2.57\%, 3.04\%, and 2.34\% in the Dice score on the Pancreas, LA, and ACDC datasets, respectively. In addition, the accuracy of our method is very close to the fully supervised method on the ACDC dataset, and even exceeds the fully supervised method on the Pancreas and LA dataset. (Code available at \url{//github.com/pascalcpp/SDCL}).

RowHammer is a major read disturbance mechanism in DRAM where repeatedly accessing (hammering) a row of DRAM cells (DRAM row) induces bitflips in other physically nearby DRAM rows. RowHammer solutions perform preventive actions (e.g., refresh neighbor rows of the hammered row) that mitigate such bitflips to preserve memory isolation, a fundamental building block of security and privacy in modern computing systems. However, preventive actions induce non-negligible memory request latency and system performance overheads as they interfere with memory requests. As shrinking technology node size over DRAM chip generations exacerbates RowHammer, the overheads of RowHammer solutions become prohibitively expensive. As a result, a malicious program can effectively hog the memory system and deny service to benign applications by causing many RowHammer-preventive actions. In this work, we tackle the performance overheads of RowHammer solutions by tracking and throttling the generators of memory accesses that trigger RowHammer solutions. To this end, we propose BreakHammer. BreakHammer 1) observes the time-consuming RowHammer-preventive actions of existing RowHammer mitigation mechanisms, 2) identifies hardware threads that trigger many of these actions, and 3) reduces the memory bandwidth usage of each identified thread. As such, BreakHammer significantly reduces the number of RowHammer-preventive actions performed, thereby improving 1) system performance and DRAM energy, and 2) reducing the maximum slowdown induced on a benign application, with near-zero area overhead. Our extensive evaluations demonstrate that BreakHammer effectively reduces the negative performance, energy, and fairness effects of eight RowHammer mitigation mechanisms. To foster further research we open-source our BreakHammer implementation and scripts at //github.com/CMU-SAFARI/BreakHammer.

LLMs with visual inputs, i.e., Vision Language Models (VLMs), have the capacity to process state information as visual-textual prompts and respond with policy decisions in text. We propose LLaRA: Large Language and Robotics Assistant, a framework that formulates robot action policy as conversations and provides improved action outputs when trained with auxiliary data that complements policy learning. We first introduce an automated pipeline to generate conversation-style instruction tuning data from existing behavior cloning data. Then we enrich the dataset in a self-supervised fashion by formulating six auxiliary tasks. A VLM finetuned with the resulting collection of datasets can generate meaningful robot action policy decisions. Our experiments across multiple simulated and real-world environments demonstrate the state-of-the-art performance of the proposed LLaRA framework. The code, datasets, and pretrained models are available at //github.com/LostXine/LLaRA.

Spiking neural networks (SNNs) are posited as a computationally efficient and biologically plausible alternative to conventional neural architectures, with their core computational framework primarily using the leaky integrate-and-fire (LIF) neuron model. However, the limited hidden state representation of LIF neurons, characterized by a scalar membrane potential, and sequential spike generation process, poses challenges for effectively developing scalable spiking models to address long-range dependencies in sequence learning tasks. In this study, we develop a scalable probabilistic spiking learning framework for long-range dependency tasks leveraging the fundamentals of state space models. Unlike LIF neurons that rely on the determinitic Heaviside function for a sequential process of spike generation, we introduce a SpikeSampler layer that samples spikes stochastically based on an SSM-based neuronal model while allowing parallel computations. To address non-differentiability of the spiking operation and enable effective training, we also propose a surrogate function tailored for the stochastic nature of the SpikeSampler layer. To enhance inter-neuron communication, we introduce the SpikeMixer block, which integrates spikes from neuron populations in each layer. This is followed by a ClampFuse layer, incorporating a residual connection to capture complex dependencies, enabling scalability of the model. Our models attain state-of-the-art performance among SNN models across diverse long-range dependency tasks, encompassing the Long Range Arena benchmark, permuted sequential MNIST, and the Speech Command dataset and demonstrate sparse spiking pattern highlighting its computational efficiency.

Automatic medical image segmentation technology has the potential to expedite pathological diagnoses, thereby enhancing the efficiency of patient care. However, medical images often have complex textures and structures, and the models often face the problem of reduced image resolution and information loss due to downsampling. To address this issue, we propose HC-Mamba, a new medical image segmentation model based on the modern state space model Mamba. Specifically, we introduce the technique of dilated convolution in the HC-Mamba model to capture a more extensive range of contextual information without increasing the computational cost by extending the perceptual field of the convolution kernel. In addition, the HC-Mamba model employs depthwise separable convolutions, significantly reducing the number of parameters and the computational power of the model. By combining dilated convolution and depthwise separable convolutions, HC-Mamba is able to process large-scale medical image data at a much lower computational cost while maintaining a high level of performance. We conduct comprehensive experiments on segmentation tasks including organ segmentation and skin lesion, and conduct extensive experiments on Synapse, ISIC17 and ISIC18 to demonstrate the potential of the HC-Mamba model in medical image segmentation. The experimental results show that HC-Mamba exhibits competitive performance on all these datasets, thereby proving its effectiveness and usefulness in medical image segmentation.

Transformers have achieved superior performances in many tasks in natural language processing and computer vision, which also intrigues great interests in the time series community. Among multiple advantages of transformers, the ability to capture long-range dependencies and interactions is especially attractive for time series modeling, leading to exciting progress in various time series applications. In this paper, we systematically review transformer schemes for time series modeling by highlighting their strengths as well as limitations through a new taxonomy to summarize existing time series transformers in two perspectives. From the perspective of network modifications, we summarize the adaptations of module level and architecture level of the time series transformers. From the perspective of applications, we categorize time series transformers based on common tasks including forecasting, anomaly detection, and classification. Empirically, we perform robust analysis, model size analysis, and seasonal-trend decomposition analysis to study how Transformers perform in time series. Finally, we discuss and suggest future directions to provide useful research guidance. To the best of our knowledge, this paper is the first work to comprehensively and systematically summarize the recent advances of Transformers for modeling time series data. We hope this survey will ignite further research interests in time series Transformers.

Graph convolutional networks (GCNs) have recently become one of the most powerful tools for graph analytics tasks in numerous applications, ranging from social networks and natural language processing to bioinformatics and chemoinformatics, thanks to their ability to capture the complex relationships between concepts. At present, the vast majority of GCNs use a neighborhood aggregation framework to learn a continuous and compact vector, then performing a pooling operation to generalize graph embedding for the classification task. These approaches have two disadvantages in the graph classification task: (1)when only the largest sub-graph structure ($k$-hop neighbor) is used for neighborhood aggregation, a large amount of early-stage information is lost during the graph convolution step; (2) simple average/sum pooling or max pooling utilized, which loses the characteristics of each node and the topology between nodes. In this paper, we propose a novel framework called, dual attention graph convolutional networks (DAGCN) to address these problems. DAGCN automatically learns the importance of neighbors at different hops using a novel attention graph convolution layer, and then employs a second attention component, a self-attention pooling layer, to generalize the graph representation from the various aspects of a matrix graph embedding. The dual attention network is trained in an end-to-end manner for the graph classification task. We compare our model with state-of-the-art graph kernels and other deep learning methods. The experimental results show that our framework not only outperforms other baselines but also achieves a better rate of convergence.

The cross-domain recommendation technique is an effective way of alleviating the data sparsity in recommender systems by leveraging the knowledge from relevant domains. Transfer learning is a class of algorithms underlying these techniques. In this paper, we propose a novel transfer learning approach for cross-domain recommendation by using neural networks as the base model. We assume that hidden layers in two base networks are connected by cross mappings, leading to the collaborative cross networks (CoNet). CoNet enables dual knowledge transfer across domains by introducing cross connections from one base network to another and vice versa. CoNet is achieved in multi-layer feedforward networks by adding dual connections and joint loss functions, which can be trained efficiently by back-propagation. The proposed model is evaluated on two real-world datasets and it outperforms baseline models by relative improvements of 3.56\% in MRR and 8.94\% in NDCG, respectively.

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