Spectral Laplacian methods, widely used in computer graphics and manifold learning, have been recently proposed for the Statistical Process Control (SPC) of a sequence of manufactured parts, whose 3-dimensional metrology is acquired with non-contact sensors. These techniques provide an {\em intrinsic} solution to the SPC problem, that is, a solution exclusively based on measurements on the scanned surfaces or 2-manifolds without making reference to their ambient space. These methods, therefore, avoid the computationally expensive, non-convex registration step needed to align the parts, as required by previous methods for SPC based on 3-dimensional measurements. Once a SPC mechanism triggers and out-of-control alarm, however, an additional problem remains: that of locating where on the surface of the part that triggered the SPC alarm there is a significant shape difference with respect to either an in-control part or its nominal (CAD) design. In the past, only registration-based solutions existed for this problem. In this paper, we present a new registration-free solution to the part localization problem. Our approach uses a functional map between the manifolds to be compared, that is, a map between functions defined on each manifold based on intrinsic differential operators, in particular, the Laplace-Beltrami operator, in order to construct a point to point mapping between the two manifolds and be able to locate defects on the suspected part. A recursive partitioning algorithm is presented to define a region of interest on the surface of the part where defects are likely to occur, which results in considerable computational advantages. The functional map method involves a very large number of point-to-point comparisons based on noisy measurements, and a statistical thresholding method is presented to filter the false positives in the underlying massive multiple comparisons problem.
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The Infinitesimal Calculus explores mainly two measurements: the instantaneous rates of change and the accumulation of quantities. This work shows that scientists, engineers, mathematicians, and teachers increasingly apply another change measurements tool: functions' local trends. While it seems to be a special case of the rate (via the derivative sign), this work proposes a separate and favorable mathematical framework for the trend, called Semi-discrete Calculus.
We present a sheaf-theoretic construction of shape space -- the space of all shapes. We do this by describing a homotopy sheaf on the poset category of constructible sets, where each set is mapped to its Persistent Homology Transform (PHT). Recent results that build on fundamental work of Schapira have shown that this transform is injective, thus making the PHT a good summary object for each shape. Our homotopy sheaf result allows us to "glue" PHTs of different shapes together to build up the PHT of a larger shape. In the case where our shape is a polyhedron we prove a generalized nerve lemma for the PHT. Finally, by re-examining the sampling result of Smale-Niyogi-Weinberger, we show that we can reliably approximate the PHT of a manifold by a polyhedron up to arbitrary precision.
Laser-induced breakdown spectroscopy is a preferred technique for fast and direct multi-elemental mapping of samples under ambient pressure, without any limitation on the targeted element. However, LIBS mapping data have two peculiarities: an intrinsically low signal-to-noise ratio due to single-shot measurements, and a high dimensionality due to the high number of spectra acquired for imaging. This is all the truer as lateral resolution gets higher: in this case, the ablation spot diameter is reduced, as well as the ablated mass and the emission signal, while the number of spectra for a given surface increases. Therefore, efficient extraction of physico-chemical information from a noisy and large dataset is a major issue. Multivariate approaches were introduced by several authors as a means to cope with such data, particularly Principal Component Analysis. Yet, PCA is known to present theoretical constraints for the consistent reconstruction of the dataset, and has therefore limitations to efficient interpretation of LIBS mapping data. In this paper, we introduce HyperPCA, a new analysis tool for hyperspectral images based on a sparse representation of the data using Discrete Wavelet Transform and kernel-based sparse PCA to reduce the impact of noise on the data and to consistently reconstruct the spectroscopic signal, with a particular emphasis on LIBS data. The method is first illustrated using simulated LIBS mapping datasets to emphasize its performances with highly noisy and/or highly interfered spectra. Comparisons to standard PCA and to traditional univariate data analyses are provided. Finally, it is used to process real data in two cases that clearly illustrate the potential of the proposed algorithm. We show that the method presents advantages both in quantity and quality of the information recovered, thus improving the physico-chemical characterisation of analysed surfaces.
Remote-sensing (RS) Change Detection (CD) aims to detect "changes of interest" from co-registered bi-temporal images. The performance of existing deep supervised CD methods is attributed to the large amounts of annotated data used to train the networks. However, annotating large amounts of remote sensing images is labor-intensive and expensive, particularly with bi-temporal images, as it requires pixel-wise comparisons by a human expert. On the other hand, we often have access to unlimited unlabeled multi-temporal RS imagery thanks to ever-increasing earth observation programs. In this paper, we propose a simple yet effective way to leverage the information from unlabeled bi-temporal images to improve the performance of CD approaches. More specifically, we propose a semi-supervised CD model in which we formulate an unsupervised CD loss in addition to the supervised Cross-Entropy (CE) loss by constraining the output change probability map of a given unlabeled bi-temporal image pair to be consistent under the small random perturbations applied on the deep feature difference map that is obtained by subtracting their latent feature representations. Experiments conducted on two publicly available CD datasets show that the proposed semi-supervised CD method can reach closer to the performance of supervised CD even with access to as little as 10% of the annotated training data. Code available at //github.com/wgcban/SemiCD
The shift towards end-to-end deep learning has brought unprecedented advances in many areas of computer vision. However, deep neural networks are trained on images with resolutions that rarely exceed $1,000 \times 1,000$ pixels. The growing use of scanners that create images with extremely high resolutions (average can be $100,000 \times 100,000$ pixels) thereby presents novel challenges to the field. Most of the published methods preprocess high-resolution images into a set of smaller patches, imposing an a priori belief on the best properties of the extracted patches (magnification, field of view, location, etc.). Herein, we introduce Magnifying Networks (MagNets) as an alternative deep learning solution for gigapixel image analysis that does not rely on a preprocessing stage nor requires the processing of billions of pixels. MagNets can learn to dynamically retrieve any part of a gigapixel image, at any magnification level and field of view, in an end-to-end fashion with minimal ground truth (a single global, slide-level label). Our results on the publicly available Camelyon16 and Camelyon17 datasets corroborate to the effectiveness and efficiency of MagNets and the proposed optimization framework for whole slide image classification. Importantly, MagNets process far less patches from each slide than any of the existing approaches ($10$ to $300$ times less).
SVD (singular value decomposition) is one of the basic tools of machine learning, allowing to optimize basis for a given matrix. However, sometimes we have a set of matrices $\{A_k\}_k$ instead, and would like to optimize a single common basis for them: find orthogonal matrices $U$, $V$, such that $\{U^T A_k V\}$ set of matrices is somehow simpler. For example DCT-II is orthonormal basis of functions commonly used in image/video compression - as discussed here, this kind of basis can be quickly automatically optimized for a given dataset. While also discussed gradient descent optimization might be computationally costly, there is proposed CSVD (common SVD): fast general approach based on SVD. Specifically, we choose $U$ as built of eigenvectors of $\sum_i (w_k)^q (A_k A_k^T)^p$ and $V$ of $\sum_k (w_k)^q (A_k^T A_k)^p$, where $w_k$ are their weights, $p,q>0$ are some chosen powers e.g. 1/2, optionally with normalization e.g. $A \to A - rc^T$ where $r_i=\sum_j A_{ij}, c_j =\sum_i A_{ij}$.
Cross-slide image analysis provides additional information by analysing the expression of different biomarkers as compared to a single slide analysis. These biomarker stained slides are analysed side by side, revealing unknown relations between them. During the slide preparation, a tissue section may be placed at an arbitrary orientation as compared to other sections of the same tissue block. The problem is compounded by the fact that tissue contents are likely to change from one section to the next and there may be unique artefacts on some of the slides. This makes registration of each section to a reference section of the same tissue block an important pre-requisite task before any cross-slide analysis. We propose a deep feature based registration (DFBR) method which utilises data-driven features to estimate the rigid transformation. We adopted a multi-stage strategy for improving the quality of registration. We also developed a visualisation tool to view registered pairs of WSIs at different magnifications. With the help of this tool, one can apply a transformation on the fly without the need to generate transformed source WSI in a pyramidal form. We compared the performance of data-driven features with that of hand-crafted features on the COMET dataset. Our approach can align the images with low registration errors. Generally, the success of non-rigid registration is dependent on the quality of rigid registration. To evaluate the efficacy of the DFBR method, the first two steps of the ANHIR winner's framework are replaced with our DFBR to register challenge provided image pairs. The modified framework produces comparable results to that of challenge winning team.
One of the most important problems in system identification and statistics is how to estimate the unknown parameters of a given model. Optimization methods and specialized procedures, such as Empirical Minimization (EM) can be used in case the likelihood function can be computed. For situations where one can only simulate from a parametric model, but the likelihood is difficult or impossible to evaluate, a technique known as the Two-Stage (TS) Approach can be applied to obtain reliable parametric estimates. Unfortunately, there is currently a lack of theoretical justification for TS. In this paper, we propose a statistical decision-theoretical derivation of TS, which leads to Bayesian and Minimax estimators. We also show how to apply the TS approach on models for independent and identically distributed samples, by computing quantiles of the data as a first step, and using a linear function as the second stage. The proposed method is illustrated via numerical simulations.
We recall some of the history of the information-theoretic approach to deriving core results in probability theory and indicate parts of the recent resurgence of interest in this area with current progress along several interesting directions. Then we give a new information-theoretic proof of a finite version of de Finetti's classical representation theorem for finite-valued random variables. We derive an upper bound on the relative entropy between the distribution of the first $k$ in a sequence of $n$ exchangeable random variables, and an appropriate mixture over product distributions. The mixing measure is characterised as the law of the empirical measure of the original sequence, and de Finetti's result is recovered as a corollary. The proof is nicely motivated by the Gibbs conditioning principle in connection with statistical mechanics, and it follows along an appealing sequence of steps. The technical estimates required for these steps are obtained via the use of a collection of combinatorial tools known within information theory as `the method of types.'
We present a monocular Simultaneous Localization and Mapping (SLAM) using high level object and plane landmarks, in addition to points. The resulting map is denser, more compact and meaningful compared to point only SLAM. We first propose a high order graphical model to jointly infer the 3D object and layout planes from single image considering occlusions and semantic constraints. The extracted cuboid object and layout planes are further optimized in a unified SLAM framework. Objects and planes can provide more semantic constraints such as Manhattan and object supporting relationships compared to points. Experiments on various public and collected datasets including ICL NUIM and TUM mono show that our algorithm can improve camera localization accuracy compared to state-of-the-art SLAM and also generate dense maps in many structured environments.
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