Frequently in socio-environmental sciences, models are used as tools to represent, understand, project and predict the behaviour of these complex systems. Along the modelling chain, Good Modelling Practices have been evolving that ensure -- amongst others -- that models are transparent and their results replicable. Whenever such models are represented in software, Good Modelling meet Good Software Practices, such as a tractable development workflow, good code, collaborative development and governance, continuous integration and deployment; and they meet Good Scientific Practices, such as attribution of copyrights and acknowledgement of intellectual property, publication of a software paper and archiving. Too often in existing socio-environmental model software, these practices have been regarded as an add-on to be considered at a later stage only; modellers have shied away from publishing their model as open source out of fear that having to add good practices is too demanding. We here argue for making a habit of following a list of simple and not so simple practices early on in the implementation of the model life cycle. We contextualise cherry-picked and hands-on practices for supporting Good Modelling Practice, and we demonstrate their application in the example context of the Viable North Sea fisheries socio-ecological systems model.
Protecting the intellectual property of machine learning models is a hot topic and many watermarking schemes for deep neural networks have been proposed in the literature. Unfortunately, prior work largely neglected the investigation of watermarking techniques for other types of models, including decision tree ensembles, which are a state-of-the-art model for classification tasks on non-perceptual data. In this paper, we present the first watermarking scheme designed for decision tree ensembles, focusing in particular on random forest models. We discuss watermark creation and verification, presenting a thorough security analysis with respect to possible attacks. We finally perform an experimental evaluation of the proposed scheme, showing excellent results in terms of accuracy and security against the most relevant threats.
To mitigate societal biases implicitly encoded in recent successful pretrained language models, a diverse array of approaches have been proposed to encourage model fairness, focusing on prompting, data augmentation, regularized fine-tuning, and more. Despite the development, it is nontrivial to reach a principled understanding of fairness and an effective algorithm that can consistently debias language models. In this work, by rigorous evaluations of Neural Collapse -- a learning phenomenon happen in last-layer representations and classifiers in deep networks -- on fairness-related words, we find that debiased language models exhibit collapsed alignment between token representations and word embeddings. More importantly, this observation inspires us to design a principled fine-tuning method that can effectively improve fairness in a wide range of debiasing methods, while still preserving the performance of language models on standard natural language understanding tasks. We attach our code at //anonymous.4open.science/r/Fairness_NC-457E .
In spite of the plethora of success stories with graph neural networks (GNNs) on modelling graph-structured data, they are notoriously vulnerable to over-squashing, whereby tasks necessitate the mixing of information between distance pairs of nodes. To address this problem, prior work suggests rewiring the graph structure to improve information flow. Alternatively, a significant body of research has dedicated itself to discovering and precomputing bottleneck-free graph structures to ameliorate over-squashing. One well regarded family of bottleneck-free graphs within the mathematical community are expander graphs, with prior work$\unicode{x2014}$Expander Graph Propagation (EGP)$\unicode{x2014}$proposing the use of a well-known expander graph family$\unicode{x2014}$the Cayley graphs of the $\mathrm{SL}(2,\mathbb{Z}_n)$ special linear group$\unicode{x2014}$as a computational template for GNNs. However, in EGP the computational graphs used are truncated to align with a given input graph. In this work, we show that truncation is detrimental to the coveted expansion properties. Instead, we propose CGP, a method to propagate information over a complete Cayley graph structure, thereby ensuring it is bottleneck-free to better alleviate over-squashing. Our empirical evidence across several real-world datasets not only shows that CGP recovers significant improvements as compared to EGP, but it is also akin to or outperforms computationally complex graph rewiring techniques.
Protecting personal data about individuals, such as event traces in process mining, is an inherently difficult task since an event trace leaks information about the path in a process model that an individual has triggered. Yet, prior anonymization methods of event traces like k-anonymity or event log sanitization struggled to protect against such leakage, in particular against adversaries with sufficient background knowledge. In this work, we provide a method that tackles the challenge of summarizing sensitive event traces by learning the underlying process tree in a privacy-preserving manner. We prove via the so-called Differential Privacy (DP) property that from the resulting summaries no useful inference can be drawn about any personal data in an event trace. On the technical side, we introduce a differentially private approximation (DPIM) of the Inductive Miner. Experimentally, we compare our DPIM with the Inductive Miner on 14 real-world event traces by evaluating well-known metrics: fitness, precision, simplicity, and generalization. The experiments show that our DPIM not only protects personal data but also generates faithful process trees that exhibit little utility loss above the Inductive Miner.
Information retrieval (IR) methods, like retrieval augmented generation, are fundamental to modern applications but often lack statistical guarantees. Conformal prediction addresses this by retrieving sets guaranteed to include relevant information, yet existing approaches produce large-sized sets, incurring high computational costs and slow response times. In this work, we introduce a score refinement method that applies a simple monotone transformation to retrieval scores, leading to significantly smaller conformal sets while maintaining their statistical guarantees. Experiments on various BEIR benchmarks validate the effectiveness of our approach in producing compact sets containing relevant information.
This book is the result of a seminar in which we reviewed multimodal approaches and attempted to create a solid overview of the field, starting with the current state-of-the-art approaches in the two subfields of Deep Learning individually. Further, modeling frameworks are discussed where one modality is transformed into the other, as well as models in which one modality is utilized to enhance representation learning for the other. To conclude the second part, architectures with a focus on handling both modalities simultaneously are introduced. Finally, we also cover other modalities as well as general-purpose multi-modal models, which are able to handle different tasks on different modalities within one unified architecture. One interesting application (Generative Art) eventually caps off this booklet.
Existing Collaborative Filtering (CF) methods are mostly designed based on the idea of matching, i.e., by learning user and item embeddings from data using shallow or deep models, they try to capture the associative relevance patterns in data, so that a user embedding can be matched with relevant item embeddings using designed or learned similarity functions. However, as a cognition rather than a perception intelligent task, recommendation requires not only the ability of pattern recognition and matching from data, but also the ability of cognitive reasoning in data. In this paper, we propose to advance Collaborative Filtering (CF) to Collaborative Reasoning (CR), which means that each user knows part of the reasoning space, and they collaborate for reasoning in the space to estimate preferences for each other. Technically, we propose a Neural Collaborative Reasoning (NCR) framework to bridge learning and reasoning. Specifically, we integrate the power of representation learning and logical reasoning, where representations capture similarity patterns in data from perceptual perspectives, and logic facilitates cognitive reasoning for informed decision making. An important challenge, however, is to bridge differentiable neural networks and symbolic reasoning in a shared architecture for optimization and inference. To solve the problem, we propose a modularized reasoning architecture, which learns logical operations such as AND ($\wedge$), OR ($\vee$) and NOT ($\neg$) as neural modules for implication reasoning ($\rightarrow$). In this way, logical expressions can be equivalently organized as neural networks, so that logical reasoning and prediction can be conducted in a continuous space. Experiments on real-world datasets verified the advantages of our framework compared with both shallow, deep and reasoning models.
The aim of this work is to develop a fully-distributed algorithmic framework for training graph convolutional networks (GCNs). The proposed method is able to exploit the meaningful relational structure of the input data, which are collected by a set of agents that communicate over a sparse network topology. After formulating the centralized GCN training problem, we first show how to make inference in a distributed scenario where the underlying data graph is split among different agents. Then, we propose a distributed gradient descent procedure to solve the GCN training problem. The resulting model distributes computation along three lines: during inference, during back-propagation, and during optimization. Convergence to stationary solutions of the GCN training problem is also established under mild conditions. Finally, we propose an optimization criterion to design the communication topology between agents in order to match with the graph describing data relationships. A wide set of numerical results validate our proposal. To the best of our knowledge, this is the first work combining graph convolutional neural networks with distributed optimization.
We introduce an approach for deep reinforcement learning (RL) that improves upon the efficiency, generalization capacity, and interpretability of conventional approaches through structured perception and relational reasoning. It uses self-attention to iteratively reason about the relations between entities in a scene and to guide a model-free policy. Our results show that in a novel navigation and planning task called Box-World, our agent finds interpretable solutions that improve upon baselines in terms of sample complexity, ability to generalize to more complex scenes than experienced during training, and overall performance. In the StarCraft II Learning Environment, our agent achieves state-of-the-art performance on six mini-games -- surpassing human grandmaster performance on four. By considering architectural inductive biases, our work opens new directions for overcoming important, but stubborn, challenges in deep RL.
This paper proposes a method to modify traditional convolutional neural networks (CNNs) into interpretable CNNs, in order to clarify knowledge representations in high conv-layers of CNNs. In an interpretable CNN, each filter in a high conv-layer represents a certain object part. We do not need any annotations of object parts or textures to supervise the learning process. Instead, the interpretable CNN automatically assigns each filter in a high conv-layer with an object part during the learning process. Our method can be applied to different types of CNNs with different structures. The clear knowledge representation in an interpretable CNN can help people understand the logics inside a CNN, i.e., based on which patterns the CNN makes the decision. Experiments showed that filters in an interpretable CNN were more semantically meaningful than those in traditional CNNs.