Park et al. [TCS 2020] observed that the similarity between two (numerical) strings can be captured by the Cartesian trees: The Cartesian tree of a string is a binary tree recursively constructed by picking up the smallest value of the string as the root of the tree. Two strings of equal length are said to Cartesian-tree match if their Cartesian trees are isomorphic. Park et al. [TCS 2020] introduced the following Cartesian tree substring matching (CTMStr) problem: Given a text string $T$ of length $n$ and a pattern string of length $m$, find every consecutive substring $S = T[i..j]$ of a text string $T$ such that $S$ and $P$ Cartesian-tree match. They showed how to solve this problem in $\tilde{O}(n+m)$ time. In this paper, we introduce the Cartesian tree subsequence matching (CTMSeq) problem, that asks to find every minimal substring $S = T[i..j]$ of $T$ such that $S$ contains a subsequence $S'$ which Cartesian-tree matches $P$. We prove that the CTMSeq problem can be solved efficiently, in $O(m n p(n))$ time, where $p(n)$ denotes the update/query time for dynamic predecessor queries. By using a suitable dynamic predecessor data structure, we obtain $O(mn \log \log n)$-time $O(n \log m)$-space solution for CTMSeq. This contrasts CTMSeq with closely related order-preserving subsequence matching (OPMSeq) which was shown to be NP-hard by Bose et al. [IPL 1998].
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We describe a polynomial-time algorithm which, given a graph $G$ with treewidth $t$, approximates the pathwidth of $G$ to within a ratio of $O(t\sqrt{\log t})$. This is the first algorithm to achieve an $f(t)$-approximation for some function $f$. Our approach builds on the following key insight: every graph with large pathwidth has large treewidth or contains a subdivision of a large complete binary tree. Specifically, we show that every graph with pathwidth at least $th+2$ has treewidth at least $t$ or contains a subdivision of a complete binary tree of height $h+1$. The bound $th+2$ is best possible up to a multiplicative constant. This result was motivated by, and implies (with $c=2$), the following conjecture of Kawarabayashi and Rossman (SODA'18): there exists a universal constant $c$ such that every graph with pathwidth $\Omega(k^c)$ has treewidth at least $k$ or contains a subdivision of a complete binary tree of height $k$. Our main technical algorithm takes a graph $G$ and some (not necessarily optimal) tree decomposition of $G$ of width $t'$ in the input, and it computes in polynomial time an integer $h$, a certificate that $G$ has pathwidth at least $h$, and a path decomposition of $G$ of width at most $(t'+1)h+1$. The certificate is closely related to (and implies) the existence of a subdivision of a complete binary tree of height $h$. The approximation algorithm for pathwidth is then obtained by combining this algorithm with the approximation algorithm of Feige, Hajiaghayi, and Lee (STOC'05) for treewidth.
While algorithms for planar graphs have received a lot of attention, few papers have focused on the additional power that one gets from assuming an embedding of the graph is available. While in the classic sequential setting, this assumption gives no additional power (as a planar graph can be embedded in linear time), we show that this is far from being the case in other settings. We assume that the embedding is straight-line, but our methods also generalize to non-straight-line embeddings. Specifically, we focus on sublinear-time computation and massively parallel computation (MPC). Our main technical contribution is a sublinear-time algorithm for computing a relaxed version of an $r$-division. We then show how this can be used to estimate Lipschitz additive graph parameters. This includes, for example, the maximum matching, maximum independent set, or the minimum dominating set. We also show how this can be used to solve some property testing problems with respect to the vertex edit distance. In the second part of our paper, we show an MPC algorithm that computes an $r$-division of the input graph. We show how this can be used to solve various classical graph problems with space per machine of $O(n^{2/3+\epsilon})$ for some $\epsilon>0$, and while performing $O(1)$ rounds. This includes for example approximate shortest paths or the minimum spanning tree. Our results also imply an improved MPC algorithm for Euclidean minimum spanning tree.
Stable matchings have been studied extensively in social choice literature. The focus has been mostly on integral matchings, in which the nodes on the two sides are wholly matched. A fractional matching, which is a convex combination of integral matchings, is a natural extension of integral matchings. The topic of stability of fractional matchings has started receiving attention only very recently. Further, incentive compatibility in the context of fractional matchings has received very little attention. With this as the backdrop, our paper studies the important topic of incentive compatibility of mechanisms to find stable fractional matchings. We work with preferences expressed in the form of cardinal utilities. Our first result is an impossibility result that there are matching instances for which no mechanism that produces a stable fractional matching can be incentive compatible or even approximately incentive compatible. This provides the motivation to seek special classes of matching instances for which there exist incentive compatible mechanisms that produce stable fractional matchings. Our study leads to a class of matching instances that admit unique stable fractional matchings. We first show that a unique stable fractional matching for a matching instance exists if and only if the given matching instance satisfies the conditional mutual first preference (CMFP) property. To this end, we provide a polynomial-time algorithm that makes ingenious use of envy-graphs to find a non-integral stable matching whenever the preferences are strict and the given instance is not a CMFP matching instance. For this class of CMFP matching instances, we prove that every mechanism that produces the unique stable fractional matching is (a) incentive compatible and further (b) resistant to coalitional manipulations.
In this paper, we propose a depth-first search (DFS) algorithm for searching maximum matchings in general graphs. Unlike blossom shrinking algorithms, which store all possible alternative alternating paths in the super-vertices shrunk from blossoms, the newly proposed algorithm does not involve blossom shrinking. The basic idea is to deflect the alternating path when facing blossoms. The algorithm maintains detour information in an auxiliary stack to minimize the redundant data structures. A benefit of our technique is to avoid spending time on shrinking and expanding blossoms. This DFS algorithm can determine a maximum matching of a general graph with $m$ edges and $n$ vertices in $O(mn)$ time with space complexity $O(n)$.
In this paper we describe two simple, fast, space-efficient algorithms for finding all matches of an indeterminate pattern $\s{p} = \s{p}[1..m]$ in an indeterminate string $\s{x} = \s{x}[1..n]$, where both \s{p} and \s{x} are defined on a "small" ordered alphabet $\Sigma$ -- say, $\sigma = |\Sigma| \le 9$. Both algorithms depend on a preprocessing phase that replaces $\Sigma$ by an integer alphabet $\Sigma_I$ of size $\sigma_I = \sigma$ which (reversibly, in time linear in string length) maps both \s{x} and \s{p} into equivalent regular strings \s{y} and \s{q}, respectively, on $\Sigma_I$, whose maximum (indeterminate) letter can be expressed in a 32-bit word (for $\sigma \le 4$, thus for DNA sequences, an 8-bit representation suffices). We first describe an efficient version \textsc{KMP\_Indet} of the venerable Knuth-Morris-Pratt algorithm to find all occurrences of \s{q} in \s{y} (that is, of \s{p} in \s{x}), but, whenever necessary, using the prefix array, rather than the border array, to control shifts of the transformed pattern \s{q} along the transformed string \s{y}. %Although requiring $\O(m^2n)$ time in the theoretical worst case, in cases of practical interest \textsc{KMP\_Indet} executes in $\O(n)$ time. We go on to describe a similar efficient version \textsc{BM\_Indet} of the Boyer-Moore algorithm that turns out to execute significantly faster than \textsc{KMP\_Indet} over a wide range of test cases. %A noteworthy feature is that both algorithms require very little additional space: $\Theta(m)$ words. We conjecture that a similar approach may yield practical and efficient indeterminate equivalents to other well-known pattern-matching algorithms, in particular the several variants of Boyer-Moore.
For a connected graph $G=(V,E)$, a matching $M\subseteq E$ is a matching cut of $G$ if $G-M$ is disconnected. It is known that for an integer $d$, the corresponding decision problem Matching Cut is polynomial-time solvable for graphs of diameter at most $d$ if $d\leq 2$ and NP-complete if $d\geq 3$. We prove the same dichotomy for graphs of bounded radius. For a graph $H$, a graph is $H$-free if it does not contain $H$ as an induced subgraph. As a consequence of our result, we can solve Matching Cut in polynomial time for $P_6$-free graphs, extending a recent result of Feghali for $P_5$-free graphs. We then extend our result to hold even for $(sP_3+P_6)$-free graphs for every $s\geq 0$ and initiate a complexity classification of Matching Cut for $H$-free graphs.
A faster reduction of the dynamic time warping distance to the longest increasing subsequence length
The similarity between a pair of time series, i.e., sequences of indexed values in time order, is often estimated by the dynamic time warping (DTW) distance, instead of any in the well-studied family of measures including the longest common subsequence (LCS) length and the edit distance. Although it may seem as if the DTW and the LCS(-like) measures are essentially different, we reveal that the DTW distance can be represented by the longest increasing subsequence (LIS) length of a sequence of integers, which is the LCS length between the integer sequence and itself sorted. For a given pair of time series of length $n$ such that the dissimilarity between any elements is an integer between zero and $c$, we propose an integer sequence that represents any substring-substring DTW distance as its band-substring LIS length. The length of the produced integer sequence is $O(c n^2)$, which can be translated to $O(n^2)$ for constant dissimilarity functions. To demonstrate that techniques developed under the LCS(-like) measures are directly applicable to analysis of time series via our reduction of DTW to LIS, we present time-efficient algorithms for DTW-related problems utilizing the semi-local sequence comparison technique developed for LCS-related problems.
We consider the space needed to store a searchable partial-sums data structure with constant query time for a static sequence $S$ of $n$ positive integers in $o \left( \frac{\log n}{(\log \log n)^2} \right)$. Arroyuelo and Raman (2022) recently showed that such a structure can fit in $n H_0 (S) + o (n)$ bits. Starting with Ferragina and Venturini's (2007) $n H_k$-compressed representation of strings that supports fast random access, and augmenting it with sublinear data structures reminiscent of those Raman, Raman and Rao (2002) used in their succinct bitvectors, we slightly improve Arroyuelo and Raman's bound to $n H_k (S) + o (n)$ bits for $k \in o \left( \frac{\log n}{(\log \log n)^2} \right)$.
A High-dimensional and sparse (HiDS) matrix is frequently encountered in a big data-related application like an e-commerce system or a social network services system. To perform highly accurate representation learning on it is of great significance owing to the great desire of extracting latent knowledge and patterns from it. Latent factor analysis (LFA), which represents an HiDS matrix by learning the low-rank embeddings based on its observed entries only, is one of the most effective and efficient approaches to this issue. However, most existing LFA-based models perform such embeddings on a HiDS matrix directly without exploiting its hidden graph structures, thereby resulting in accuracy loss. To address this issue, this paper proposes a graph-incorporated latent factor analysis (GLFA) model. It adopts two-fold ideas: 1) a graph is constructed for identifying the hidden high-order interaction (HOI) among nodes described by an HiDS matrix, and 2) a recurrent LFA structure is carefully designed with the incorporation of HOI, thereby improving the representa-tion learning ability of a resultant model. Experimental results on three real-world datasets demonstrate that GLFA outperforms six state-of-the-art models in predicting the missing data of an HiDS matrix, which evidently supports its strong representation learning ability to HiDS data.
A palindromic substring $T[i.. j]$ of a string $T$ is said to be a shortest unique palindromic substring (SUPS) in $T$ for an interval $[p, q]$ if $T[i.. j]$ is a shortest one such that $T[i.. j]$ occurs only once in $T$, and $[i, j]$ contains $[p, q]$. The SUPS problem is, given a string $T$ of length $n$, to construct a data structure that can compute all the SUPSs for any given query interval. It is known that any SUPS query can be answered in $O(\alpha)$ time after $O(n)$-time preprocessing, where $\alpha$ is the number of SUPSs to output [Inoue et al., 2018]. In this paper, we first show that $\alpha$ is at most $4$, and the upper bound is tight. Also, we present an algorithm to solve the SUPS problem for a sliding window that can answer any query in $O(\log\log W)$ time and update data structures in amortized $O(\log\sigma)$ time, where $W$ is the size of the window, and $\sigma$ is the alphabet size. Furthermore, we consider the SUPS problem in the after-edit model and present an efficient algorithm. Namely, we present an algorithm that uses $O(n)$ time for preprocessing and answers any $k$ SUPS queries in $O(\log n\log\log n + k\log\log n)$ time after single character substitution. As a by-product, we propose a fully-dynamic data structure for range minimum queries (RmQs) with a constraint where the width of each query range is limited to polylogarithmic. The constrained RmQ data structure can answer such a query in constant time and support a single-element edit operation in amortized constant time.
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