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Graph is an important data representation which occurs naturally in the real world applications \cite{goyal2018graph}. Therefore, analyzing graphs provides users with better insights in different areas such as anomaly detection \cite{ma2021comprehensive}, decision making \cite{fan2023graph}, clustering \cite{tsitsulin2023graph}, classification \cite{wang2021mixup} and etc. However, most of these methods require high levels of computational time and space. We can use other ways like embedding to reduce these costs. Knowledge graph (KG) embedding is a technique that aims to achieve the vector representation of a KG. It represents entities and relations of a KG in a low-dimensional space while maintaining the semantic meanings of them. There are different methods for embedding graphs including random walk-based methods such as node2vec, metapath2vec and regpattern2vec. However, most of these methods bias the walks based on a rigid pattern usually hard-coded in the algorithm. In this work, we introduce \textit{subgraph2vec} for embedding KGs where walks are run inside a user-defined subgraph. We use this embedding for link prediction and prove our method has better performance in most cases in comparison with the previous ones.

Generalization to unseen data is a key desideratum for deep networks, but its relation to classification accuracy is unclear. Using a minimalist vision dataset and a measure of generalizability, we show that popular networks, from deep convolutional networks (CNNs) to transformers, vary in their power to extrapolate to unseen classes both across layers and across architectures. Accuracy is not a good predictor of generalizability, and generalization varies non-monotonically with layer depth.

Electromagnetic (EM) body models designed to predict Radio-Frequency (RF) propagation are time-consuming methods which prevent their adoption in strict real-time computational imaging problems, such as human body localization and sensing. Physics-informed Generative Neural Network (GNN) models have been recently proposed to reproduce EM effects, namely to simulate or reconstruct missing data or samples by incorporating relevant EM principles and constraints. The paper discusses a Variational Auto-Encoder (VAE) model which is trained to reproduce the effects of human motions on the EM field and incorporate EM body diffraction principles. Proposed physics-informed generative neural network models are verified against both classical diffraction-based EM tools and full-wave EM body simulations.

The cosinor model is frequently used to represent gene expression given the 24 hour day-night cycle time at which a corresponding tissue sample is collected. However, the timing of many biological processes are based on individual-specific internal timing systems that are offset relative to day-night cycle time. When these offsets are unknown, they pose a challenge in performing statistical analyses with a cosinor model. To clarify, when sample collection times are mis-recorded, cosinor regression can yield attenuated parameter estimates, which would also attenuate test statistics. This attenuation bias would inflate type II error rates in identifying genes with oscillatory behavior. This paper proposes a heuristic method to account for unknown offsets when tissue samples are collected in a longitudinal design. Specifically, this method involves first estimating individual-specific cosinor models for each gene. The times of sample collection for that individual are then translated based on the estimated phase-shifts across every gene. Simulation studies confirm that this method mitigates bias in estimation and inference. Illustrations with real data from three circadian biology studies highlight that this method produces parameter estimates and inferences akin to those obtained when each individual's offset is known.

We consider the problem of making nonparametric inference in multi-dimensional diffusion models from low-frequency data. Statistical analysis in this setting is notoriously challenging due to the intractability of the likelihood and its gradient, and computational methods have thus far largely resorted to expensive simulation-based techniques. In this article, we propose a new computational approach which is motivated by PDE theory and is built around the characterisation of the transition densities as solutions of the associated heat (Fokker-Planck) equation. Employing optimal regularity results from the theory of parabolic PDEs, we prove a novel characterisation for the gradient of the likelihood. Using these developments, for the nonlinear inverse problem of recovering the diffusivity (in divergence form models), we then show that the numerical evaluation of the likelihood and its gradient can be reduced to standard elliptic eigenvalue problems, solvable by powerful finite element methods. This enables the efficient implementation of a large class of statistical algorithms, including (i) preconditioned Crank-Nicolson and Langevin-type methods for posterior sampling, and (ii) gradient-based descent optimisation schemes to compute maximum likelihood and maximum-a-posteriori estimates. We showcase the effectiveness of these methods via extensive simulation studies in a nonparametric Bayesian model with Gaussian process priors. Interestingly, the optimisation schemes provided satisfactory numerical recovery while exhibiting rapid convergence towards stationary points despite the problem nonlinearity; thus our approach may lead to significant computational speed-ups. The reproducible code is available online at //github.com/MattGiord/LF-Diffusion.

Optical backbone networks are required to be highly dynamic in supporting requests with flexible bandwidth granularities to cope with the demands of new broadband wireless and fixed access networks. To provide this flexibility, services are offered by taking requested bandwidth profile into consideration, instead of assigning a fixed amount of bandwidth to each request. New techniques are developed for the resource management of the elastic optical networks to realize services with a specified bandwidth profile, consisting of minimum, average, and maximum required number of spectrum slots, in addition to holding time. In this work, two new schemes are proposed to realize such services, exploiting a probabilistic spectrum partitioning approach. This new probabilistic spectrum partitioning scheme is devised to enhance the chance of accommodating requests and consequently lower request blocking probability. It enforces different probabilities to contributing spectrum partitions in a certain service realization. Taking advantage of this probabilistic spectrum partitioning and a profile-based routing, we introduce two multistage spectrum assignment methods to make a certain lightpath meet the requested service profile constraints, considering the time-weighted average of the assigned spectrum slots. The results indicate that our algorithms can successfully realize the requests with the probability of 0.993 for the offered loads less than 400 erlang.

Transformers have been the most successful architecture for various speech modeling tasks, including speech separation. However, the self-attention mechanism in transformers with quadratic complexity is inefficient in computation and memory. Recent models incorporate new layers and modules along with transformers for better performance but also introduce extra model complexity. In this work, we replace transformers with Mamba, a selective state space model, for speech separation. We propose dual-path Mamba, which models short-term and long-term forward and backward dependency of speech signals using selective state spaces. Our experimental results on the WSJ0-2mix data show that our dual-path Mamba models of comparably smaller sizes outperform state-of-the-art RNN model DPRNN, CNN model WaveSplit, and transformer model Sepformer. Code: //github.com/xi-j/Mamba-TasNet

In large-scale systems there are fundamental challenges when centralised techniques are used for task allocation. The number of interactions is limited by resource constraints such as on computation, storage, and network communication. We can increase scalability by implementing the system as a distributed task-allocation system, sharing tasks across many agents. However, this also increases the resource cost of communications and synchronisation, and is difficult to scale. In this paper we present four algorithms to solve these problems. The combination of these algorithms enable each agent to improve their task allocation strategy through reinforcement learning, while changing how much they explore the system in response to how optimal they believe their current strategy is, given their past experience. We focus on distributed agent systems where the agents' behaviours are constrained by resource usage limits, limiting agents to local rather than system-wide knowledge. We evaluate these algorithms in a simulated environment where agents are given a task composed of multiple subtasks that must be allocated to other agents with differing capabilities, to then carry out those tasks. We also simulate real-life system effects such as networking instability. Our solution is shown to solve the task allocation problem to 6.7% of the theoretical optimal within the system configurations considered. It provides 5x better performance recovery over no-knowledge retention approaches when system connectivity is impacted, and is tested against systems up to 100 agents with less than a 9% impact on the algorithms' performance.

We present ResMLP, an architecture built entirely upon multi-layer perceptrons for image classification. It is a simple residual network that alternates (i) a linear layer in which image patches interact, independently and identically across channels, and (ii) a two-layer feed-forward network in which channels interact independently per patch. When trained with a modern training strategy using heavy data-augmentation and optionally distillation, it attains surprisingly good accuracy/complexity trade-offs on ImageNet. We will share our code based on the Timm library and pre-trained models.

Nowadays, the Convolutional Neural Networks (CNNs) have achieved impressive performance on many computer vision related tasks, such as object detection, image recognition, image retrieval, etc. These achievements benefit from the CNNs outstanding capability to learn the input features with deep layers of neuron structures and iterative training process. However, these learned features are hard to identify and interpret from a human vision perspective, causing a lack of understanding of the CNNs internal working mechanism. To improve the CNN interpretability, the CNN visualization is well utilized as a qualitative analysis method, which translates the internal features into visually perceptible patterns. And many CNN visualization works have been proposed in the literature to interpret the CNN in perspectives of network structure, operation, and semantic concept. In this paper, we expect to provide a comprehensive survey of several representative CNN visualization methods, including Activation Maximization, Network Inversion, Deconvolutional Neural Networks (DeconvNet), and Network Dissection based visualization. These methods are presented in terms of motivations, algorithms, and experiment results. Based on these visualization methods, we also discuss their practical applications to demonstrate the significance of the CNN interpretability in areas of network design, optimization, security enhancement, etc.