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For regression tasks one often leverages large datasets for training predictive machine learning models. However, using large datasets may not be feasible due to computational limitations or high data labelling costs. Therefore, suitably selecting small training sets from large pools of unlabelled data points is essential to maximize model performance while maintaining efficiency. In this work, we study Farthest Point Sampling (FPS), a data selection approach that aims to minimize the fill distance of the selected set. We derive an upper bound for the maximum expected prediction error, conditional to the location of the unlabelled data points, that linearly depends on the training set fill distance. For empirical validation, we perform experiments using two regression models on three datasets. We empirically show that selecting a training set by aiming to minimize the fill distance, thereby minimizing our derived bound, significantly reduces the maximum prediction error of various regression models, outperforming alternative sampling approaches by a large margin. Furthermore, we show that selecting training sets with the FPS can also increase model stability for the specific case of Gaussian kernel regression approaches.

JPEG is still the most widely used image compression algorithm. Most image compression algorithms only consider uncompressed original image, while ignoring a large number of already existing JPEG images. Recently, JPEG recompression approaches have been proposed to further reduce the size of JPEG files. However, those methods only consider JPEG lossless recompression, which is just a special case of the rate-distortion theorem. In this paper, we propose a unified lossly and lossless JPEG recompression framework, which consists of learned quantization table and Markovian hierarchical variational autoencoders. Experiments show that our method can achieve arbitrarily low distortion when the bitrate is close to the upper bound, namely the bitrate of the lossless compression model. To the best of our knowledge, this is the first learned method that bridges the gap between lossy and lossless recompression of JPEG images.

Due to the scarcity and specific imaging characteristics in medical images, light-weighting Vision Transformers (ViTs) for efficient medical image segmentation is a significant challenge, and current studies have not yet paid attention to this issue. This work revisits the relationship between CNNs and Transformers in lightweight universal networks for medical image segmentation, aiming to integrate the advantages of both worlds at the infrastructure design level. In order to leverage the inductive bias inherent in CNNs, we abstract a Transformer-like lightweight CNNs block (ConvUtr) as the patch embeddings of ViTs, feeding Transformer with denoised, non-redundant and highly condensed semantic information. Moreover, an adaptive Local-Global-Local (LGL) block is introduced to facilitate efficient local-to-global information flow exchange, maximizing Transformer's global context information extraction capabilities. Finally, we build an efficient medical image segmentation model (MobileUtr) based on CNN and Transformer. Extensive experiments on five public medical image datasets with three different modalities demonstrate the superiority of MobileUtr over the state-of-the-art methods, while boasting lighter weights and lower computational cost. Code is available at //github.com/FengheTan9/MobileUtr.

Interpretability methods aim to understand the algorithm implemented by a trained model (e.g., a Transofmer) by examining various aspects of the model, such as the weight matrices or the attention patterns. In this work, through a combination of theoretical results and carefully controlled experiments on synthetic data, we take a critical view of methods that exclusively focus on individual parts of the model, rather than consider the network as a whole. We consider a simple synthetic setup of learning a (bounded) Dyck language. Theoretically, we show that the set of models that (exactly or approximately) solve this task satisfy a structural characterization derived from ideas in formal languages (the pumping lemma). We use this characterization to show that the set of optima is qualitatively rich; in particular, the attention pattern of a single layer can be ``nearly randomized'', while preserving the functionality of the network. We also show via extensive experiments that these constructions are not merely a theoretical artifact: even after severely constraining the architecture of the model, vastly different solutions can be reached via standard training. Thus, interpretability claims based on inspecting individual heads or weight matrices in the Transformer can be misleading.

We prove a far-reaching strengthening of Szemer\'edi's regularity lemma for intersection graphs of pseudo-segments. It shows that the vertex set of such a graph can be partitioned into a bounded number of parts of roughly the same size such that almost all bipartite graphs between different pairs of parts are complete or empty. We use this to get an improved bound on disjoint edges in simple topological graphs, showing that every $n$-vertex simple topological graph with no $k$ pairwise disjoint edges has at most $n(\log n)^{O(\log k)}$ edges.

A prompt is a sequence of symbol or tokens, selected from a vocabulary according to some rule, which is prepended/concatenated to a textual query. A key problem is how to select the sequence of tokens: in this paper we formulate it as a combinatorial optimization problem. The high dimensionality of the token space com-pounded by the length of the prompt sequence requires a very efficient solution. In this paper we propose a Bayesian optimization method, executed in a continuous em-bedding of the combinatorial space. In this paper we focus on hard prompt tuning (HPT) which directly searches for discrete tokens to be added to the text input with-out requiring access to the large language model (LLM) and can be used also when LLM is available only as a black-box. This is critically important if LLMs are made available in the Model as a Service (MaaS) manner as in GPT-4. The current manu-script is focused on the optimization of discrete prompts for classification tasks. The discrete prompts give rise to difficult combinatorial optimization problem which easily become intractable given the dimension of the token space in realistic applications. The optimization method considered in this paper is Bayesian optimization (BO) which has become the dominant approach in black-box optimization for its sample efficiency along with its modular structure and versatility. In this paper we use BoTorch, a library for Bayesian optimization research built on top of pyTorch. Albeit preliminary and obtained using a 'vanilla' version of BO, the experiments on RoB-ERTa on six benchmarks, show a good performance across a variety of tasks and enable an analysis of the tradeoff between size of the search space, accuracy and wall clock time.

The "RNA world" represents a novel frontier for the study of fundamental biological processes and human diseases and is paving the way for the development of new drugs tailored to the patient's biomolecular characteristics. Although scientific data about coding and non-coding RNA molecules are continuously produced and available from public repositories, they are scattered across different databases and a centralized, uniform, and semantically consistent representation of the "RNA world" is still lacking. We propose RNA-KG, a knowledge graph encompassing biological knowledge about RNAs gathered from more than 50 public databases, integrating functional relationships with genes, proteins, and chemicals and ontologically grounded biomedical concepts. To develop RNA-KG, we first identified, pre-processed, and characterized each data source; next, we built a meta-graph that provides an ontological description of the KG by representing all the bio-molecular entities and medical concepts of interest in this domain, as well as the types of interactions connecting them. Finally, we leveraged an instance-based semantically abstracted knowledge model to specify the ontological alignment according to which RNA-KG was generated. RNA-KG can be downloaded in different formats and also queried by a SPARQL endpoint. A thorough topological analysis of the resulting heterogeneous graph provides further insights into the characteristics of the "RNA world". RNA-KG can be both directly explored and visualized, and/or analyzed by applying computational methods to infer bio-medical knowledge from its heterogeneous nodes and edges. The resource can be easily updated with new experimental data, and specific views of the overall KG can be extracted according to the bio-medical problem to be studied.

Incorporating prior knowledge into pre-trained language models has proven to be effective for knowledge-driven NLP tasks, such as entity typing and relation extraction. Current pre-training procedures usually inject external knowledge into models by using knowledge masking, knowledge fusion and knowledge replacement. However, factual information contained in the input sentences have not been fully mined, and the external knowledge for injecting have not been strictly checked. As a result, the context information cannot be fully exploited and extra noise will be introduced or the amount of knowledge injected is limited. To address these issues, we propose MLRIP, which modifies the knowledge masking strategies proposed by ERNIE-Baidu, and introduce a two-stage entity replacement strategy. Extensive experiments with comprehensive analyses illustrate the superiority of MLRIP over BERT-based models in military knowledge-driven NLP tasks.

We present ResMLP, an architecture built entirely upon multi-layer perceptrons for image classification. It is a simple residual network that alternates (i) a linear layer in which image patches interact, independently and identically across channels, and (ii) a two-layer feed-forward network in which channels interact independently per patch. When trained with a modern training strategy using heavy data-augmentation and optionally distillation, it attains surprisingly good accuracy/complexity trade-offs on ImageNet. We will share our code based on the Timm library and pre-trained models.

Artificial neural networks thrive in solving the classification problem for a particular rigid task, acquiring knowledge through generalized learning behaviour from a distinct training phase. The resulting network resembles a static entity of knowledge, with endeavours to extend this knowledge without targeting the original task resulting in a catastrophic forgetting. Continual learning shifts this paradigm towards networks that can continually accumulate knowledge over different tasks without the need to retrain from scratch. We focus on task incremental classification, where tasks arrive sequentially and are delineated by clear boundaries. Our main contributions concern 1) a taxonomy and extensive overview of the state-of-the-art, 2) a novel framework to continually determine the stability-plasticity trade-off of the continual learner, 3) a comprehensive experimental comparison of 11 state-of-the-art continual learning methods and 4 baselines. We empirically scrutinize method strengths and weaknesses on three benchmarks, considering Tiny Imagenet and large-scale unbalanced iNaturalist and a sequence of recognition datasets. We study the influence of model capacity, weight decay and dropout regularization, and the order in which the tasks are presented, and qualitatively compare methods in terms of required memory, computation time, and storage.