Understanding causal relationships within Gene Regulatory Networks (GRNs) is essential for unraveling the gene interactions in cellular processes. However, causal discovery in GRNs is a challenging problem for multiple reasons including the existence of cyclic feedback loops and uncertainty that yields diverse possible causal structures. Previous works in this area either ignore cyclic dynamics (assume acyclic structure) or struggle with scalability. We introduce Swift-DynGFN as a novel framework that enhances causal structure learning in GRNs while addressing scalability concerns. Specifically, Swift-DynGFN exploits gene-wise independence to boost parallelization and to lower computational cost. Experiments on real single-cell RNA velocity and synthetic GRN datasets showcase the advancement in learning causal structure in GRNs and scalability in larger systems.
Large Language Models (LLMs) have garnered significant attention for their powerful ability in natural language understanding and reasoning. In this paper, we present a comprehensive empirical study to explore the performance of LLMs on misinformation detection tasks. This study stands as the pioneering investigation into the understanding capabilities of multiple LLMs regarding both content and propagation across social media platforms. Our empirical studies on five misinformation detection datasets show that LLMs with diverse prompts achieve comparable performance in text-based misinformation detection but exhibit notably constrained capabilities in comprehending propagation structure compared to existing models in propagation-based misinformation detection. Besides, we further design four instruction-tuned strategies to enhance LLMs for both content and propagation-based misinformation detection. These strategies boost LLMs to actively learn effective features from multiple instances or hard instances, and eliminate irrelevant propagation structures, thereby achieving better detection performance. Extensive experiments further demonstrate LLMs would play a better capacity in content and propagation structure under these proposed strategies and achieve promising detection performance. These findings highlight the potential ability of LLMs to detect misinformation.
In this study, we introduce an innovative Quantum-enhanced Support Vector Machine (QSVM) approach for stellar classification, leveraging the power of quantum computing and GPU acceleration. Our QSVM algorithm significantly surpasses traditional methods such as K-Nearest Neighbors (KNN) and Logistic Regression (LR), particularly in handling complex binary and multi-class scenarios within the Harvard stellar classification system. The integration of quantum principles notably enhances classification accuracy, while GPU acceleration using the cuQuantum SDK ensures computational efficiency and scalability for large datasets in quantum simulators. This synergy not only accelerates the processing process but also improves the accuracy of classifying diverse stellar types, setting a new benchmark in astronomical data analysis. Our findings underscore the transformative potential of quantum machine learning in astronomical research, marking a significant leap forward in both precision and processing speed for stellar classification. This advancement has broader implications for astrophysical and related scientific fields
MRI scans provide valuable medical information, however they also contain sensitive and personally identifiable information (PII) that needs to be protected. Whereas MRI metadata is easily sanitized, MRI image data is a privacy risk because it contains information to render highly-realistic 3D visualizations of a patient's head, enabling malicious actors to possibly identify the subject by cross-referencing a database. Data anonymization and de-identification is concerned with ensuring the privacy and confidentiality of individuals' personal information. Traditional MRI de-identification methods remove privacy-sensitive parts (e.g. eyes, nose etc.) from a given scan. This comes at the expense of introducing a domain shift that can throw off downstream analyses. Recently, a GAN-based approach was proposed to de-identify a patient's scan by remodeling it (\eg changing the face) rather than by removing parts. In this work, we propose CP-MAE, a model that de-identifies the face using masked autoencoders and that outperforms all previous approaches in terms of downstream task performance as well as de-identification. With our method we are able to synthesize scans of resolution up to $256^3$ (previously $128^3$) which constitutes an eight-fold increase in the number of voxels. Using our construction we were able to design a system that exhibits a highly robust training stage, making it easy to fit the network on novel data.
Although the estimation of 3D human pose and shape (HPS) is rapidly progressing, current methods still cannot reliably estimate moving humans in global coordinates, which is critical for many applications. This is particularly challenging when the camera is also moving, entangling human and camera motion. To address these issues, we adopt a novel 5D representation (space, time, and identity) that enables end-to-end reasoning about people in scenes. Our method, called TRACE, introduces several novel architectural components. Most importantly, it uses two new "maps" to reason about the 3D trajectory of people over time in camera, and world, coordinates. An additional memory unit enables persistent tracking of people even during long occlusions. TRACE is the first one-stage method to jointly recover and track 3D humans in global coordinates from dynamic cameras. By training it end-to-end, and using full image information, TRACE achieves state-of-the-art performance on tracking and HPS benchmarks. The code and dataset are released for research purposes.
Federated Learning (FL) has been recently receiving increasing consideration from the cybersecurity community as a way to collaboratively train deep learning models with distributed profiles of cyber threats, with no disclosure of training data. Nevertheless, the adoption of FL in cybersecurity is still in its infancy, and a range of practical aspects have not been properly addressed yet. Indeed, the Federated Averaging algorithm at the core of the FL concept requires the availability of test data to control the FL process. Although this might be feasible in some domains, test network traffic of newly discovered attacks cannot be always shared without disclosing sensitive information. In this paper, we address the convergence of the FL process in dynamic cybersecurity scenarios, where the trained model must be frequently updated with new recent attack profiles to empower all members of the federation with the latest detection features. To this aim, we propose FLAD (adaptive Federated Learning Approach to DDoS attack detection), an FL solution for cybersecurity applications based on an adaptive mechanism that orchestrates the FL process by dynamically assigning more computation to those members whose attacks profiles are harder to learn, without the need of sharing any test data to monitor the performance of the trained model. Using a recent dataset of DDoS attacks, we demonstrate that FLAD outperforms state-of-the-art FL algorithms in terms of convergence time and accuracy across a range of unbalanced datasets of heterogeneous DDoS attacks. We also show the robustness of our approach in a realistic scenario, where we retrain the deep learning model multiple times to introduce the profiles of new attacks on a pre-trained model.
This article presents the affordances that Generative Artificial Intelligence can have in disinformation context, one of the major threats to our digitalized society. We present a research framework to generate customized agent-based social networks for disinformation simulations that would enable understanding and evaluation of the phenomena whilst discussing open challenges.
Text Classification is the most essential and fundamental problem in Natural Language Processing. While numerous recent text classification models applied the sequential deep learning technique, graph neural network-based models can directly deal with complex structured text data and exploit global information. Many real text classification applications can be naturally cast into a graph, which captures words, documents, and corpus global features. In this survey, we bring the coverage of methods up to 2023, including corpus-level and document-level graph neural networks. We discuss each of these methods in detail, dealing with the graph construction mechanisms and the graph-based learning process. As well as the technological survey, we look at issues behind and future directions addressed in text classification using graph neural networks. We also cover datasets, evaluation metrics, and experiment design and present a summary of published performance on the publicly available benchmarks. Note that we present a comprehensive comparison between different techniques and identify the pros and cons of various evaluation metrics in this survey.
In pace with developments in the research field of artificial intelligence, knowledge graphs (KGs) have attracted a surge of interest from both academia and industry. As a representation of semantic relations between entities, KGs have proven to be particularly relevant for natural language processing (NLP), experiencing a rapid spread and wide adoption within recent years. Given the increasing amount of research work in this area, several KG-related approaches have been surveyed in the NLP research community. However, a comprehensive study that categorizes established topics and reviews the maturity of individual research streams remains absent to this day. Contributing to closing this gap, we systematically analyzed 507 papers from the literature on KGs in NLP. Our survey encompasses a multifaceted review of tasks, research types, and contributions. As a result, we present a structured overview of the research landscape, provide a taxonomy of tasks, summarize our findings, and highlight directions for future work.
Knowledge Graph Embedding (KGE) aims to learn representations for entities and relations. Most KGE models have gained great success, especially on extrapolation scenarios. Specifically, given an unseen triple (h, r, t), a trained model can still correctly predict t from (h, r, ?), or h from (?, r, t), such extrapolation ability is impressive. However, most existing KGE works focus on the design of delicate triple modeling function, which mainly tells us how to measure the plausibility of observed triples, but offers limited explanation of why the methods can extrapolate to unseen data, and what are the important factors to help KGE extrapolate. Therefore in this work, we attempt to study the KGE extrapolation of two problems: 1. How does KGE extrapolate to unseen data? 2. How to design the KGE model with better extrapolation ability? For the problem 1, we first discuss the impact factors for extrapolation and from relation, entity and triple level respectively, propose three Semantic Evidences (SEs), which can be observed from train set and provide important semantic information for extrapolation. Then we verify the effectiveness of SEs through extensive experiments on several typical KGE methods. For the problem 2, to make better use of the three levels of SE, we propose a novel GNN-based KGE model, called Semantic Evidence aware Graph Neural Network (SE-GNN). In SE-GNN, each level of SE is modeled explicitly by the corresponding neighbor pattern, and merged sufficiently by the multi-layer aggregation, which contributes to obtaining more extrapolative knowledge representation. Finally, through extensive experiments on FB15k-237 and WN18RR datasets, we show that SE-GNN achieves state-of-the-art performance on Knowledge Graph Completion task and performs a better extrapolation ability.
The problem of Multiple Object Tracking (MOT) consists in following the trajectory of different objects in a sequence, usually a video. In recent years, with the rise of Deep Learning, the algorithms that provide a solution to this problem have benefited from the representational power of deep models. This paper provides a comprehensive survey on works that employ Deep Learning models to solve the task of MOT on single-camera videos. Four main steps in MOT algorithms are identified, and an in-depth review of how Deep Learning was employed in each one of these stages is presented. A complete experimental comparison of the presented works on the three MOTChallenge datasets is also provided, identifying a number of similarities among the top-performing methods and presenting some possible future research directions.