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This paper presents a novel approach to construct regularizing operators for severely ill-posed Fredholm integral equations of the first kind by introducing parametrized discretization. The optimal values of discretization and regularization parameters are computed simultaneously by solving a minimization problem formulated based on a regularization parameter search criterion. The effectiveness of the proposed approach is demonstrated through examples of noisy Laplace transform inversions and the deconvolution of nuclear magnetic resonance relaxation data.

With the increasing availability of large scale datasets, computational power and tools like automatic differentiation and expressive neural network architectures, sequential data are now often treated in a data-driven way, with a dynamical model trained from the observation data. While neural networks are often seen as uninterpretable black-box architectures, they can still benefit from physical priors on the data and from mathematical knowledge. In this paper, we use a neural network architecture which leverages the long-known Koopman operator theory to embed dynamical systems in latent spaces where their dynamics can be described linearly, enabling a number of appealing features. We introduce methods that enable to train such a model for long-term continuous reconstruction, even in difficult contexts where the data comes in irregularly-sampled time series. The potential for self-supervised learning is also demonstrated, as we show the promising use of trained dynamical models as priors for variational data assimilation techniques, with applications to e.g. time series interpolation and forecasting.

In this research work, we propose a high-order time adapted scheme for pricing a coupled system of fixed-free boundary constant elasticity of variance (CEV) model on both equidistant and locally refined space-grid. The performance of our method is substantially enhanced to improve irregularities in the model which are both inherent and induced. Furthermore, the system of coupled PDEs is strongly nonlinear and involves several time-dependent coefficients that include the first-order derivative of the early exercise boundary. These coefficients are approximated from a fourth-order analytical approximation which is derived using a regularized square-root function. The semi-discrete equation for the option value and delta sensitivity is obtained from a non-uniform fourth-order compact finite difference scheme. Fifth-order 5(4) Dormand-Prince time integration method is used to solve the coupled system of discrete equations. Enhancing the performance of our proposed method with local mesh refinement and adaptive strategies enables us to obtain highly accurate solution with very coarse space grids, hence reducing computational runtime substantially. We further verify the performance of our methodology as compared with some of the well-known and better-performing existing methods.

Developing an efficient computational scheme for high-dimensional Bayesian variable selection in generalised linear models and survival models has always been a challenging problem due to the absence of closed-form solutions for the marginal likelihood. The RJMCMC approach can be employed to samples model and coefficients jointly, but effective design of the transdimensional jumps of RJMCMC can be challenge, making it hard to implement. Alternatively, the marginal likelihood can be derived using data-augmentation scheme e.g. Polya-gamma data argumentation for logistic regression) or through other estimation methods. However, suitable data-augmentation schemes are not available for every generalised linear and survival models, and using estimations such as Laplace approximation or correlated pseudo-marginal to derive marginal likelihood within a locally informed proposal can be computationally expensive in the "large n, large p" settings. In this paper, three main contributions are presented. Firstly, we present an extended Point-wise implementation of Adaptive Random Neighbourhood Informed proposal (PARNI) to efficiently sample models directly from the marginal posterior distribution in both generalised linear models and survival models. Secondly, in the light of the approximate Laplace approximation, we also describe an efficient and accurate estimation method for the marginal likelihood which involves adaptive parameters. Additionally, we describe a new method to adapt the algorithmic tuning parameters of the PARNI proposal by replacing the Rao-Blackwellised estimates with the combination of a warm-start estimate and an ergodic average. We present numerous numerical results from simulated data and 8 high-dimensional gene fine mapping data-sets to showcase the efficiency of the novel PARNI proposal compared to the baseline add-delete-swap proposal.

We study a variant of quantum hypothesis testing wherein an additional 'inconclusive' measurement outcome is added, allowing one to abstain from attempting to discriminate the hypotheses. The error probabilities are then conditioned on a successful attempt, with inconclusive trials disregarded. We completely characterise this task in both the single-shot and asymptotic regimes, providing exact formulas for the optimal error probabilities. In particular, we prove that the asymptotic error exponent of discriminating any two quantum states $\rho$ and $\sigma$ is given by the Hilbert projective metric $D_{\max}(\rho\|\sigma) + D_{\max}(\sigma \| \rho)$ in asymmetric hypothesis testing, and by the Thompson metric $\max \{ D_{\max}(\rho\|\sigma), D_{\max}(\sigma \| \rho) \}$ in symmetric hypothesis testing. This endows these two quantities with fundamental operational interpretations in quantum state discrimination. Our findings extend to composite hypothesis testing, where we show that the asymmetric error exponent with respect to any convex set of density matrices is given by a regularisation of the Hilbert projective metric. We apply our results also to quantum channels, showing that no advantage is gained by employing adaptive or even more general discrimination schemes over parallel ones, in both the asymmetric and symmetric settings. Our state discrimination results make use of no properties specific to quantum mechanics and are also valid in general probabilistic theories.

Simulating physical problems involving multi-time scale coupling is challenging due to the need of solving these multi-time scale processes simultaneously. In response to this challenge, this paper proposed an explicit multi-time step algorithm coupled with a solid dynamic relaxation scheme. The explicit scheme simplifies the equation system in contrast to the implicit scheme, while the multi-time step algorithm allows the equations of different physical processes to be solved under different time step sizes. Furthermore, an implicit viscous damping relaxation technique is applied to significantly reduce computational iterations required to achieve equilibrium in the comparatively fast solid response process. To validate the accuracy and efficiency of the proposed algorithm, two distinct scenarios, i.e., a nonlinear hardening bar stretching and a fluid diffusion coupled with Nafion membrane flexure, are simulated. The results show good agreement with experimental data and results from other numerical methods, and the simulation time is reduced firstly by independently addressing different processes with the multi-time step algorithm and secondly decreasing solid dynamic relaxation time through the incorporation of damping techniques.

The evaluation of clustering results is difficult, highly dependent on the evaluated data set and the perspective of the beholder. There are many different clustering quality measures, which try to provide a general measure to validate clustering results. A very popular measure is the Silhouette. We discuss the efficient medoid-based variant of the Silhouette, perform a theoretical analysis of its properties, provide two fast versions for the direct optimization, and discuss the use to choose the optimal number of clusters. We combine ideas from the original Silhouette with the well-known PAM algorithm and its latest improvements FasterPAM. One of the versions guarantees equal results to the original variant and provides a run speedup of $O(k^2)$. In experiments on real data with 30000 samples and $k$=100, we observed a 10464$\times$ speedup compared to the original PAMMEDSIL algorithm. Additionally, we provide a variant to choose the optimal number of clusters directly.

Recently, deep learning-based methods achieved promising performance in nuclei detection and classification applications. However, training deep learning-based methods requires a large amount of pixel-wise annotated data, which is time-consuming and labor-intensive, especially in 3D images. An alternative approach is to adapt weak-annotation methods, such as labeling each nucleus with a point, but this method does not extend from 2D histopathology images (for which it was originally developed) to 3D immunofluorescent images. The reason is that 3D images contain multiple channels (z-axis) for nuclei and different markers separately, which makes training using point annotations difficult. To address this challenge, we propose the Label-efficient Contrastive learning-based (LECL) model to detect and classify various types of nuclei in 3D immunofluorescent images. Previous methods use Maximum Intensity Projection (MIP) to convert immunofluorescent images with multiple slices to 2D images, which can cause signals from different z-stacks to falsely appear associated with each other. To overcome this, we devised an Extended Maximum Intensity Projection (EMIP) approach that addresses issues using MIP. Furthermore, we performed a Supervised Contrastive Learning (SCL) approach for weakly supervised settings. We conducted experiments on cardiovascular datasets and found that our proposed framework is effective and efficient in detecting and classifying various types of nuclei in 3D immunofluorescent images.

Spatially misaligned data can be fused by using a Bayesian melding model that assumes that underlying all observations there is a spatially continuous Gaussian random field process. This model can be used, for example, to predict air pollution levels by combining point data from monitoring stations and areal data from satellite imagery. However, if the data presents preferential sampling, that is, if the observed point locations are not independent of the underlying spatial process, the inference obtained from models that ignore such a dependence structure might not be valid. In this paper, we present a Bayesian spatial model for the fusion of point and areal data that takes into account preferential sampling. The model combines the Bayesian melding specification and a model for the stochastically dependent sampling and underlying spatial processes. Fast Bayesian inference is performed using the integrated nested Laplace approximation (INLA) and the stochastic partial differential equation (SPDE) approaches. The performance of the model is assessed using simulated data in a range of scenarios and sampling strategies that can appear in real settings. The model is also applied to predict air pollution in the USA.

In this paper, two novel classes of implicit exponential Runge-Kutta (ERK) methods are studied for solving highly oscillatory systems. Firstly, we analyze the symplectic conditions for two kinds of exponential integrators and obtain the symplectic method. In order to effectively solve highly oscillatory problems, we try to design the highly accurate implicit ERK integrators. By comparing the Taylor series expansion of numerical solution with exact solution, it can be verified that the order conditions of two new kinds of exponential methods are identical to classical Runge-Kutta (RK) methods, which implies that using the coefficients of RK methods, some highly accurate numerical methods are directly formulated. Furthermore, we also investigate the linear stability properties for these exponential methods. Finally, numerical results not only display the long time energy preservation of the symplectic method, but also present the accuracy and efficiency of these formulated methods in comparison with standard ERK methods.