Indexing intervals is a fundamental problem, finding a wide range of applications. Recent work on managing large collections of intervals in main memory focused on overlap joins and temporal aggregation problems. In this paper, we propose novel and efficient in-memory indexing techniques for intervals, with a focus on interval range queries, which are a basic component of many search and analysis tasks. First, we propose an optimized version of a single-level (flat) domain-partitioning approach, which may have large space requirements due to excessive replication. Then, we propose a hierarchical partitioning approach, which assigns each interval to at most two partitions per level and has controlled space requirements. Novel elements of our techniques include the division of the intervals at each partition into groups based on whether they begin inside or before the partition boundaries, reducing the information stored at each partition to the absolutely necessary, and the effective handling of data sparsity and skew. Experimental results on real and synthetic interval sets of different characteristics show that our approaches are typically one order of magnitude faster than the state-of-the-art.
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We develop methodology for testing hypotheses regarding the slope function in functional linear regression for time series via a reproducing kernel Hilbert space approach. In contrast to most of the literature, which considers tests for the exact nullity of the slope function, we are interested in the null hypothesis that the slope function vanishes only approximately, where deviations are measured with respect to the $L^2$-norm. An asymptotically pivotal test is proposed, which does not require the estimation of nuisance parameters and long-run covariances. The key technical tools to prove the validity of our approach include a uniform Bahadur representation and a weak invariance principle for a sequential process of estimates of the slope function. Both scalar-on-function and function-on-function linear regression are considered and finite-sample methods for implementing our methodology are provided. We also illustrate the potential of our methods by means of a small simulation study and a data example.
A kernel of a directed graph is a subset of vertices that is both independent and absorbing (every vertex not in the kernel has an out-neighbour in the kernel). Not all directed graphs contain kernels, and computing a kernel or deciding that none exist is NP-complete even on low-degree planar digraphs. The existing polynomial-time algorithms for this problem all restrict both the undirected structure and the edge orientations of the input: for example, to chordal graphs without bidirectional edges (Pass-Lanneau, Igarashi and Meunier, Discrete Appl Math 2020) or to permutation graphs where each clique has a sink (Abbas and Saoula, 4OR 2005). By contrast, we count the kernels of a fuzzy circular interval graph in polynomial time, regardless of its edge orientations, and return a kernel when one exists. (Fuzzy circular graphs were introduced by Chudnovsky and Seymour in their structure theorem for claw-free graphs.) We also consider kernels on cographs, where we establish NP-hardness in general but linear running times on the subclass of threshold graphs.
Nonnegative matrix factorization (NMF) has found many applications including topic modeling and document analysis. Hierarchical NMF (HNMF) variants are able to learn topics at various levels of granularity and illustrate their hierarchical relationship. Recently, nonnegative tensor factorization (NTF) methods have been applied in a similar fashion in order to handle data sets with complex, multi-modal structure. Hierarchical NTF (HNTF) methods have been proposed, however these methods do not naturally generalize their matrix-based counterparts. Here, we propose a new HNTF model which directly generalizes a HNMF model special case, and provide a supervised extension. We also provide a multiplicative updates training method for this model. Our experimental results show that this model more naturally illuminates the topic hierarchy than previous HNMF and HNTF methods.
In interactive theorem provers (ITPs), extensible syntax is not only crucial to lower the cognitive burden of manipulating complex mathematical objects, but plays a critical role in developing reusable abstractions in libraries. Most ITPs support such extensions in the form of restrictive "syntax sugar" substitutions and other ad hoc mechanisms, which are too rudimentary to support many desirable abstractions. As a result, libraries are littered with unnecessary redundancy. Tactic languages in these systems are plagued by a seemingly unrelated issue: accidental name capture, which often produces unexpected and counterintuitive behavior. We take ideas from the Scheme family of programming languages and solve these two problems simultaneously by proposing a novel hygienic macro system custom-built for ITPs. We further describe how our approach can be extended to cover type-directed macro expansion resulting in a single, uniform system offering multiple abstraction levels that range from supporting simplest syntax sugars to elaboration of formerly baked-in syntax. We have implemented our new macro system and integrated it into the new version of the Lean theorem prover, Lean 4. Despite its expressivity, the macro system is simple enough that it can easily be integrated into other systems.
This paper studies the hierarchical clustering problem, where the goal is to produce a dendrogram that represents clusters at varying scales of a data set. We propose the ParChain framework for designing parallel hierarchical agglomerative clustering (HAC) algorithms, and using the framework we obtain novel parallel algorithms for the complete linkage, average linkage, and Ward's linkage criteria. Compared to most previous parallel HAC algorithms, which require quadratic memory, our new algorithms require only linear memory, and are scalable to large data sets. ParChain is based on our parallelization of the nearest-neighbor chain algorithm, and enables multiple clusters to be merged on every round. We introduce two key optimizations that are critical for efficiency: a range query optimization that reduces the number of distance computations required when finding nearest neighbors of clusters, and a caching optimization that stores a subset of previously computed distances, which are likely to be reused. Experimentally, we show that our highly-optimized implementations using 48 cores with two-way hyper-threading achieve 5.8--110.1x speedup over state-of-the-art parallel HAC algorithms and achieve 13.75--54.23x self-relative speedup. Compared to state-of-the-art algorithms, our algorithms require up to 237.3x less space. Our algorithms are able to scale to data set sizes with tens of millions of points, which existing algorithms are not able to handle.
The decoding performance of product codes (PCs) and staircase codes (SCCs) based on iterative bounded-distance decoding (iBDD) can be improved with the aid of a moderate amount of soft information, maintaining a low decoding complexity. One promising approach is error-and-erasure (EaE) decoding, whose performance can be reliably estimated with density evolution (DE). However, the extrinsic message passing (EMP) decoder required by the DE analysis entails a much higher complexity than the simple intrinsic message passing (IMP) decoder. In this paper, we simplify the EMP decoding algorithm for the EaE channel for two commonly-used EaE decoders by deriving the EMP decoding results from the IMP decoder output and some additional logical operations based on the algebraic structure of the component codes and the EaE decoding rule. Simulation results show that the number of BDD steps is reduced to being comparable with IMP. Furthermore, we propose a heuristic modification of the EMP decoder that reduces the complexity further. In numerical simulations, the decoding performance of the modified decoder yields up to 0.25 dB improvement compared to standard EMP decoding.
Face is one of the most widely employed traits for person recognition, even in many large-scale applications. Despite technological advancements in face recognition systems, they still face obstacles caused by pose, expression, occlusion, and aging variations. Owing to the COVID-19 pandemic, contactless identity verification has become exceedingly vital. Recently, few studies have been conducted on the effect of face mask on adult face recognition systems (FRS). However, the impact of aging with face mask on child subject recognition has not been adequately explored. Thus, the main objective of this study is analyzing the child longitudinal impact together with face mask and other covariates on FRS. Specifically, we performed a comparative investigation of three top performing publicly available face matchers and a post-COVID-19 commercial-off-the-shelf (COTS) system under child cross-age verification and identification settings using our generated synthetic mask and no-mask samples. Furthermore, we investigated the longitudinal consequence of eyeglasses with mask and no-mask. The study exploited no-mask longitudinal child face dataset (i.e., extended Indian Child Longitudinal Face Dataset) that contains 26,258 face images of 7,473 subjects in the age group of [2, 18] over an average time span of 3.35 years. Due to the combined effects of face mask and face aging, the FaceNet, PFE, ArcFace, and COTS face verification system accuracies decrease approximately 25%, 22%, 18%, 12%, respectively.
In this paper, we introduce the \emph{interval query problem} on cube-free median graphs. Let $G$ be a cube-free median graph and $\mathcal{S}$ be a commutative semigroup. For each vertex $v$ in $G$, we are given an element $p(v)$ in $\mathcal{S}$. For each query, we are given two vertices $u,v$ in $G$ and asked to calculate the sum of $p(z)$ over all vertices $z$ belonging to a $u-v$ shortest path. This is a common generalization of range query problems on trees and grids. In this paper, we provide an algorithm to answer each interval query in $O(\log^2 n)$ time. The required data structure is constructed in $O(n\log^3 n)$ time and $O(n\log^2 n)$ space. To obtain our algorithm, we introduce a new technique, named the \emph{stairs decomposition}, to decompose an interval of cube-free median graphs into simpler substructures.
The conjoining of dynamical systems and deep learning has become a topic of great interest. In particular, neural differential equations (NDEs) demonstrate that neural networks and differential equation are two sides of the same coin. Traditional parameterised differential equations are a special case. Many popular neural network architectures, such as residual networks and recurrent networks, are discretisations. NDEs are suitable for tackling generative problems, dynamical systems, and time series (particularly in physics, finance, ...) and are thus of interest to both modern machine learning and traditional mathematical modelling. NDEs offer high-capacity function approximation, strong priors on model space, the ability to handle irregular data, memory efficiency, and a wealth of available theory on both sides. This doctoral thesis provides an in-depth survey of the field. Topics include: neural ordinary differential equations (e.g. for hybrid neural/mechanistic modelling of physical systems); neural controlled differential equations (e.g. for learning functions of irregular time series); and neural stochastic differential equations (e.g. to produce generative models capable of representing complex stochastic dynamics, or sampling from complex high-dimensional distributions). Further topics include: numerical methods for NDEs (e.g. reversible differential equations solvers, backpropagation through differential equations, Brownian reconstruction); symbolic regression for dynamical systems (e.g. via regularised evolution); and deep implicit models (e.g. deep equilibrium models, differentiable optimisation). We anticipate this thesis will be of interest to anyone interested in the marriage of deep learning with dynamical systems, and hope it will provide a useful reference for the current state of the art.
We present a hierarchical neural message passing architecture for learning on molecular graphs. Our model takes in two complementary graph representations: the raw molecular graph representation and its associated junction tree, where nodes represent meaningful clusters in the original graph, e.g., rings or bridged compounds. We then proceed to learn a molecule's representation by passing messages inside each graph, and exchange messages between the two representations using a coarse-to-fine and fine-to-coarse information flow. Our method is able to overcome some of the restrictions known from classical GNNs, like detecting cycles, while still being very efficient to train. We validate its performance on the ZINC dataset and datasets stemming from the MoleculeNet benchmark collection.
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