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APIs (Application Programming Interfaces) are reusable software libraries and are building blocks for modern rapid software development. Previous research shows that programmers frequently share and search for reviews of APIs on the mainstream software question and answer (Q&A) platforms like Stack Overflow, which motivates researchers to design tasks and approaches related to process API reviews automatically. Among these tasks, classifying API reviews into different aspects (e.g., performance or security), which is called the aspect-based API review classification, is of great importance. The current state-of-the-art (SOTA) solution to this task is based on the traditional machine learning algorithm. Inspired by the great success achieved by pre-trained models on many software engineering tasks, this study fine-tunes six pre-trained models for the aspect-based API review classification task and compares them with the current SOTA solution on an API review benchmark collected by Uddin et al. The investigated models include four models (BERT, RoBERTa, ALBERT and XLNet) that are pre-trained on natural languages, BERTOverflow that is pre-trained on text corpus extracted from posts on Stack Overflow, and CosSensBERT that is designed for handling imbalanced data. The results show that all the six fine-tuned models outperform the traditional machine learning-based tool. More specifically, the improvement on the F1-score ranges from 21.0% to 30.2%. We also find that BERTOverflow, a model pre-trained on the corpus from Stack Overflow, does not show better performance than BERT. The result also suggests that CosSensBERT also does not exhibit better performance than BERT in terms of F1, but it is still worthy of being considered as it achieves better performance on MCC and AUC.

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Formality is an important characteristic of text documents. The automatic detection of the formality level of a text is potentially beneficial for various natural language processing tasks, such as retrieval of texts with a desired formality level, integration in language learning and document editing platforms, or evaluating the desired conversation tone by chatbots. Recently two large-scale datasets were introduced for multiple languages featuring formality annotation. However, they were primarily used for the training of style transfer models. However, detection text formality on its own may also be a useful application. This work proposes the first systematic study of formality detection methods based on current (and more classic) machine learning methods and delivers the best-performing models for public usage. We conducted three types of experiments -- monolingual, multilingual, and cross-lingual. The study shows the overcome of BiLSTM-based models over transformer-based ones for the formality classification task. We release formality detection models for several languages yielding state of the art results and possessing tested cross-lingual capabilities.

Pre-trained neural Language Models (PTLM), such as CodeBERT, are recently used in software engineering as models pre-trained on large source code corpora. Their knowledge is transferred to downstream tasks (e.g. code clone detection) via fine-tuning. In natural language processing (NLP), other alternatives for transferring the knowledge of PTLMs are explored through using adapters, compact, parameter efficient modules inserted in the layers of the PTLM. Although adapters are known to facilitate adapting to many downstream tasks compared to fine-tuning the model that require retraining all of the models' parameters -- which owes to the adapters' plug and play nature and being parameter efficient -- their usage in software engineering is not explored. Here, we explore the knowledge transfer using adapters and based on the Naturalness Hypothesis proposed by Hindle et. al \cite{hindle2016naturalness}. Thus, studying the bimodality of adapters for two tasks of cloze test and code clone detection, compared to their benchmarks from the CodeXGLUE platform. These adapters are trained using programming languages and are inserted in a PTLM that is pre-trained on English corpora (N-PTLM). Three programming languages, C/C++, Python, and Java, are studied along with extensive experiments on the best setup used for adapters. Improving the results of the N-PTLM confirms the success of the adapters in knowledge transfer to software engineering, which sometimes are in par with or exceed the results of a PTLM trained on source code; while being more efficient in terms of the number of parameters, memory usage, and inference time. Our results can open new directions to build smaller models for more software engineering tasks. We open source all the scripts and the trained adapters.

The rapid growth of biomedical literature poses a significant challenge for curation and interpretation. This has become more evident during the COVID-19 pandemic. LitCovid, a literature database of COVID-19 related papers in PubMed, has accumulated over 180,000 articles with millions of accesses. Approximately 10,000 new articles are added to LitCovid every month. A main curation task in LitCovid is topic annotation where an article is assigned with up to eight topics, e.g., Treatment and Diagnosis. The annotated topics have been widely used both in LitCovid (e.g., accounting for ~18% of total uses) and downstream studies such as network generation. However, it has been a primary curation bottleneck due to the nature of the task and the rapid literature growth. This study proposes LITMC-BERT, a transformer-based multi-label classification method in biomedical literature. It uses a shared transformer backbone for all the labels while also captures label-specific features and the correlations between label pairs. We compare LITMC-BERT with three baseline models on two datasets. Its micro-F1 and instance-based F1 are 5% and 4% higher than the current best results, respectively, and only requires ~18% of the inference time than the Binary BERT baseline. The related datasets and models are available via //github.com/ncbi/ml-transformer.

Building Spoken Language Understanding (SLU) systems that do not rely on language specific Automatic Speech Recognition (ASR) is an important yet less explored problem in language processing. In this paper, we present a comparative study aimed at employing a pre-trained acoustic model to perform SLU in low resource scenarios. Specifically, we use three different embeddings extracted using Allosaurus, a pre-trained universal phone decoder: (1) Phone (2) Panphone, and (3) Allo embeddings. These embeddings are then used in identifying the spoken intent. We perform experiments across three different languages: English, Sinhala, and Tamil each with different data sizes to simulate high, medium, and low resource scenarios. Our system improves on the state-of-the-art (SOTA) intent classification accuracy by approximately 2.11% for Sinhala and 7.00% for Tamil and achieves competitive results on English. Furthermore, we present a quantitative analysis of how the performance scales with the number of training examples used per intent.

Correlation acts as a critical role in the tracking field, especially in recent popular Siamese-based trackers. The correlation operation is a simple fusion manner to consider the similarity between the template and the search region. However, the correlation operation itself is a local linear matching process, leading to lose semantic information and fall into local optimum easily, which may be the bottleneck of designing high-accuracy tracking algorithms. Is there any better feature fusion method than correlation? To address this issue, inspired by Transformer, this work presents a novel attention-based feature fusion network, which effectively combines the template and search region features solely using attention. Specifically, the proposed method includes an ego-context augment module based on self-attention and a cross-feature augment module based on cross-attention. Finally, we present a Transformer tracking (named TransT) method based on the Siamese-like feature extraction backbone, the designed attention-based fusion mechanism, and the classification and regression head. Experiments show that our TransT achieves very promising results on six challenging datasets, especially on large-scale LaSOT, TrackingNet, and GOT-10k benchmarks. Our tracker runs at approximatively 50 fps on GPU. Code and models are available at //github.com/chenxin-dlut/TransT.

Transformer is a type of deep neural network mainly based on self-attention mechanism which is originally applied in natural language processing field. Inspired by the strong representation ability of transformer, researchers propose to extend transformer for computer vision tasks. Transformer-based models show competitive and even better performance on various visual benchmarks compared to other network types such as convolutional networks and recurrent networks. In this paper we provide a literature review of these visual transformer models by categorizing them in different tasks and analyze the advantages and disadvantages of these methods. In particular, the main categories include the basic image classification, high-level vision, low-level vision and video processing. Self-attention in computer vision is also briefly revisited as self-attention is the base component in transformer. Efficient transformer methods are included for pushing transformer into real applications. Finally, we give a discussion about the further research directions for visual transformer.

Due to their inherent capability in semantic alignment of aspects and their context words, attention mechanism and Convolutional Neural Networks (CNNs) are widely applied for aspect-based sentiment classification. However, these models lack a mechanism to account for relevant syntactical constraints and long-range word dependencies, and hence may mistakenly recognize syntactically irrelevant contextual words as clues for judging aspect sentiment. To tackle this problem, we propose to build a Graph Convolutional Network (GCN) over the dependency tree of a sentence to exploit syntactical information and word dependencies. Based on it, a novel aspect-specific sentiment classification framework is raised. Experiments on three benchmarking collections illustrate that our proposed model has comparable effectiveness to a range of state-of-the-art models, and further demonstrate that both syntactical information and long-range word dependencies are properly captured by the graph convolution structure.

Extreme multi-label text classification (XMC) aims to tag each input text with the most relevant labels from an extremely large label set, such as those that arise in product categorization and e-commerce recommendation. Recently, pretrained language representation models such as BERT achieve remarkable state-of-the-art performance across a wide range of NLP tasks including sentence classification among small label sets (typically fewer than thousands). Indeed, there are several challenges in applying BERT to the XMC problem. The main challenges are: (i) the difficulty of capturing dependencies and correlations among labels, whose features may come from heterogeneous sources, and (ii) the tractability to scale to the extreme label setting as the model size can be very large and scale linearly with the size of the output space. To overcome these challenges, we propose X-BERT, the first feasible attempt to finetune BERT models for a scalable solution to the XMC problem. Specifically, X-BERT leverages both the label and document text to build label representations, which induces semantic label clusters in order to better model label dependencies. At the heart of X-BERT is finetuning BERT models to capture the contextual relations between input text and the induced label clusters. Finally, an ensemble of the different BERT models trained on heterogeneous label clusters leads to our best final model. Empirically, on a Wiki dataset with around 0.5 million labels, X-BERT achieves new state-of-the-art results where the precision@1 reaches 67:80%, a substantial improvement over 32.58%/60.91% of deep learning baseline fastText and competing XMC approach Parabel, respectively. This amounts to a 11.31% relative improvement over Parabel, which is indeed significant since the recent approach SLICE only has 5.53% relative improvement.

Time Series Classification (TSC) is an important and challenging problem in data mining. With the increase of time series data availability, hundreds of TSC algorithms have been proposed. Among these methods, only a few have considered Deep Neural Networks (DNNs) to perform this task. This is surprising as deep learning has seen very successful applications in the last years. DNNs have indeed revolutionized the field of computer vision especially with the advent of novel deeper architectures such as Residual and Convolutional Neural Networks. Apart from images, sequential data such as text and audio can also be processed with DNNs to reach state-of-the-art performance for document classification and speech recognition. In this article, we study the current state-of-the-art performance of deep learning algorithms for TSC by presenting an empirical study of the most recent DNN architectures for TSC. We give an overview of the most successful deep learning applications in various time series domains under a unified taxonomy of DNNs for TSC. We also provide an open source deep learning framework to the TSC community where we implemented each of the compared approaches and evaluated them on a univariate TSC benchmark (the UCR/UEA archive) and 12 multivariate time series datasets. By training 8,730 deep learning models on 97 time series datasets, we propose the most exhaustive study of DNNs for TSC to date.

In this paper, we propose the joint learning attention and recurrent neural network (RNN) models for multi-label classification. While approaches based on the use of either model exist (e.g., for the task of image captioning), training such existing network architectures typically require pre-defined label sequences. For multi-label classification, it would be desirable to have a robust inference process, so that the prediction error would not propagate and thus affect the performance. Our proposed model uniquely integrates attention and Long Short Term Memory (LSTM) models, which not only addresses the above problem but also allows one to identify visual objects of interests with varying sizes without the prior knowledge of particular label ordering. More importantly, label co-occurrence information can be jointly exploited by our LSTM model. Finally, by advancing the technique of beam search, prediction of multiple labels can be efficiently achieved by our proposed network model.

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