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We give new characterizations for the class of uniformly dense matroids, and we describe applications to graphic and real representable matroids. We show that a matroid is uniformly dense if and only if its base polytope contains a point with constant coordinates, and if and only if there exists a measure on the bases such that every element of the ground set has equal probability to be in a random basis with respect to this measure. As one application, we derive new spectral, structural and classification results for uniformly dense graphic matroids. In particular, we show that connected regular uniformly dense graphs are $1$-tough and thus contain a (near-)perfect matching. As a second application, we show that strictly uniformly dense real representable matroids can be represented by projection matrices with constant diagonal and that they are parametrized by a subvariety of the real Grassmannian.

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Due to its computational complexity, graph cuts for cluster detection and identification are used mostly in the form of convex relaxations. We propose to utilize the original graph cuts such as Ratio, Normalized or Cheeger Cut in order to detect clusters in weighted undirected graphs by restricting the graph cut minimization to the subset of $st$-MinCut partitions. Incorporating a vertex selection technique and restricting optimization to tightly connected clusters, we therefore combine the efficient computability of $st$-MinCuts and the intrinsic properties of Gomory-Hu trees with the cut quality of the original graph cuts, leading to linear runtime in the number of vertices and quadratic in the number of edges. Already in simple scenarios, the resulting algorithm Xist is able to approximate graph cut values better empirically than spectral clustering or comparable algorithms, even for large network datasets. We showcase its applicability by segmenting images from cell biology and provide empirical studies of runtime and classification rate.

The forecasting and computation of the stability of chaotic systems from partial observations are tasks for which traditional equation-based methods may not be suitable. In this computational paper, we propose data-driven methods to (i) infer the dynamics of unobserved (hidden) chaotic variables (full-state reconstruction); (ii) time forecast the evolution of the full state; and (iii) infer the stability properties of the full state. The tasks are performed with long short-term memory (LSTM) networks, which are trained with observations (data) limited to only part of the state: (i) the low-to-high resolution LSTM (LH-LSTM), which takes partial observations as training input, and requires access to the full system state when computing the loss; and (ii) the physics-informed LSTM (PI-LSTM), which is designed to combine partial observations with the integral formulation of the dynamical system's evolution equations. First, we derive the Jacobian of the LSTMs. Second, we analyse a chaotic partial differential equation, the Kuramoto-Sivashinsky (KS), and the Lorenz-96 system. We show that the proposed networks can forecast the hidden variables, both time-accurately and statistically. The Lyapunov exponents and covariant Lyapunov vectors, which characterize the stability of the chaotic attractors, are correctly inferred from partial observations. Third, the PI-LSTM outperforms the LH-LSTM by successfully reconstructing the hidden chaotic dynamics when the input dimension is smaller or similar to the Kaplan-Yorke dimension of the attractor. This work opens new opportunities for reconstructing the full state, inferring hidden variables, and computing the stability of chaotic systems from partial data.

In the context of finite sums minimization, variance reduction techniques are widely used to improve the performance of state-of-the-art stochastic gradient methods. Their practical impact is clear, as well as their theoretical properties. Stochastic proximal point algorithms have been studied as an alternative to stochastic gradient algorithms since they are more stable with respect to the choice of the stepsize but a proper variance reduced version is missing. In this work, we propose the first study of variance reduction techniques for stochastic proximal point algorithms. We introduce a stochastic proximal version of SVRG, SAGA, and some of their variants for smooth and convex functions. We provide several convergence results for the iterates and the objective function values. In addition, under the Polyak-{\L}ojasiewicz (PL) condition, we obtain linear convergence rates for the iterates and the function values. Our numerical experiments demonstrate the advantages of the proximal variance reduction methods over their gradient counterparts, especially about the stability with respect to the choice of the step size.

We consider two classes of natural stochastic processes on finite unlabeled graphs. These are Euclidean stochastic optimization algorithms on the adjacency matrix of weighted graphs and a modified version of the Metropolis MCMC algorithm on stochastic block models over unweighted graphs. In both cases we show that, as the size of the graph goes to infinity, the random trajectories of the stochastic processes converge to deterministic limits. These deterministic limits are curves on the space of measure-valued graphons. Measure-valued graphons, introduced by Lov\'{a}sz and Szegedy, are a refinement of the concept of graphons that can distinguish between two infinite exchangeable arrays that give rise to the same graphon limit. We introduce new metrics on this space which provide us with a natural notion of convergence for our limit theorems. This notion is equivalent to the convergence of infinite-exchangeable arrays. Under a suitable time-scaling, the Metropolis chain admits a diffusion limit as the number of vertices go to infinity. We then demonstrate that, in an appropriately formulated zero-noise limit, the stochastic process of adjacency matrices of this diffusion converge to a deterministic gradient flow curve on the space of graphons introduced in arXiv:2111.09459 [math.PR]. Under suitable assumptions, this allows us to estimate an exponential convergence rate for the Metropolis chain in a certain limiting regime. To the best of our knowledge, both the actual rate and the connection between a natural Metropolis chain commonly used in exponential random graph models and gradient flows on graphons are new in the literature.

This paper develops power series expansions of a general class of moment functions, including transition densities and option prices, of continuous-time Markov processes, including jump--diffusions. The proposed expansions extend the ones in Kristensen and Mele (2011) to cover general Markov processes. We demonstrate that the class of expansions nests the transition density and option price expansions developed in Yang, Chen, and Wan (2019) and Wan and Yang (2021) as special cases, thereby connecting seemingly different ideas in a unified framework. We show how the general expansion can be implemented for fully general jump--diffusion models. We provide a new theory for the validity of the expansions which shows that series expansions are not guaranteed to converge as more terms are added in general. Thus, these methods should be used with caution. At the same time, the numerical studies in this paper demonstrate good performance of the proposed implementation in practice when a small number of terms are included.

We discuss applications of exact structures and relative homological algebra to the study of invariants of multiparameter persistence modules. This paper is mostly expository, but does contain a pair of novel results. Over finite posets, classical arguments about the relative projective modules of an exact structure make use of Auslander-Reiten theory. One of our results establishes a new adjunction which allows us to "lift" these arguments to certain infinite posets over which Auslander-Reiten theory is not available. We give several examples of this lifting, in particular highlighting the non-existence and existence of resolutions by upsets when working with finitely presentable representations of the plane and of the closure of the positive quadrant, respectively. We then restrict our attention to finite posets. In this setting, we discuss the relationship between the global dimension of an exact structure and the representation dimension of the incidence algebra of the poset. We conclude with our second novel contribution. This is an explicit description of the irreducible morphisms between relative projective modules for several exact structures which have appeared previously in the literature.

We propose a generalization of nonlinear stability of numerical one-step integrators to Riemannian manifolds in the spirit of Butcher's notion of B-stability. Taking inspiration from Simpson-Porco and Bullo, we introduce non-expansive systems on such manifolds and define B-stability of integrators. In this first exposition, we provide concrete results for a geodesic version of the Implicit Euler (GIE) scheme. We prove that the GIE method is B-stable on Riemannian manifolds with non-positive sectional curvature. We show through numerical examples that the GIE method is expansive when applied to a certain non-expansive vector field on the 2-sphere, and that the GIE method does not necessarily possess a unique solution for large enough step sizes. Finally, we derive a new improved global error estimate for general Lie group integrators.

In this paper, we introduce a novel numerical approach for approximating the SIR model in epidemiology. Our method enhances the existing linearization procedure by incorporating a suitable relaxation term to tackle the transcendental equation of nonlinear type. Developed within the continuous framework, our relaxation method is explicit and easy to implement, relying on a sequence of linear differential equations. This approach yields accurate approximations in both discrete and analytical forms. Through rigorous analysis, we prove that, with an appropriate choice of the relaxation parameter, our numerical scheme is non-negativity-preserving and globally strongly convergent towards the true solution. These theoretical findings have not received sufficient attention in various existing SIR solvers. We also extend the applicability of our relaxation method to handle some variations of the traditional SIR model. Finally, we present numerical examples using simulated data to demonstrate the effectiveness of our proposed method.

Confidence intervals based on the central limit theorem (CLT) are a cornerstone of classical statistics. Despite being only asymptotically valid, they are ubiquitous because they permit statistical inference under very weak assumptions, and can often be applied to problems even when nonasymptotic inference is impossible. This paper introduces time-uniform analogues of such asymptotic confidence intervals. To elaborate, our methods take the form of confidence sequences (CS) -- sequences of confidence intervals that are uniformly valid over time. CSs provide valid inference at arbitrary stopping times, incurring no penalties for "peeking" at the data, unlike classical confidence intervals which require the sample size to be fixed in advance. Existing CSs in the literature are nonasymptotic, and hence do not enjoy the aforementioned broad applicability of asymptotic confidence intervals. Our work bridges the gap by giving a definition for "asymptotic CSs", and deriving a universal asymptotic CS that requires only weak CLT-like assumptions. While the CLT approximates the distribution of a sample average by that of a Gaussian at a fixed sample size, we use strong invariance principles (stemming from the seminal 1960s work of Strassen and improvements by Koml\'os, Major, and Tusn\'ady) to uniformly approximate the entire sample average process by an implicit Gaussian process. As an illustration of our theory, we derive asymptotic CSs for the average treatment effect using efficient estimators in observational studies (for which no nonasymptotic bounds can exist even in the fixed-time regime) as well as randomized experiments, enabling causal inference that can be continuously monitored and adaptively stopped.

Graph representation learning for hypergraphs can be used to extract patterns among higher-order interactions that are critically important in many real world problems. Current approaches designed for hypergraphs, however, are unable to handle different types of hypergraphs and are typically not generic for various learning tasks. Indeed, models that can predict variable-sized heterogeneous hyperedges have not been available. Here we develop a new self-attention based graph neural network called Hyper-SAGNN applicable to homogeneous and heterogeneous hypergraphs with variable hyperedge sizes. We perform extensive evaluations on multiple datasets, including four benchmark network datasets and two single-cell Hi-C datasets in genomics. We demonstrate that Hyper-SAGNN significantly outperforms the state-of-the-art methods on traditional tasks while also achieving great performance on a new task called outsider identification. Hyper-SAGNN will be useful for graph representation learning to uncover complex higher-order interactions in different applications.

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