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Autoencoders (AE) are simple yet powerful class of neural networks that compress data by projecting input into low-dimensional latent space (LS). Whereas LS is formed according to the loss function minimization during training, its properties and topology are not controlled directly. In this paper we focus on AE LS properties and propose two methods for obtaining LS with desired topology, called LS configuration. The proposed methods include loss configuration using a geometric loss term that acts directly in LS, and encoder configuration. We show that the former allows to reliably obtain LS with desired configuration by defining the positions and shapes of LS clusters for supervised AE (SAE). Knowing LS configuration allows to define similarity measure in LS to predict labels or estimate similarity for multiple inputs without using decoders or classifiers. We also show that this leads to more stable and interpretable training. We show that SAE trained for clothes texture classification using the proposed method generalizes well to unseen data from LIP, Market1501, and WildTrack datasets without fine-tuning, and even allows to evaluate similarity for unseen classes. We further illustrate the advantages of pre-configured LS similarity estimation with cross-dataset searches and text-based search using a text query without language models.

Combinatorial optimization - a field of research addressing problems that feature strongly in a wealth of scientific and industrial contexts - has been identified as one of the core potential fields of applicability of quantum computers. It is still unclear, however, to what extent quantum algorithms can actually outperform classical algorithms for this type of problems. In this work, by resorting to computational learning theory and cryptographic notions, we prove that quantum computers feature an in-principle super-polynomial advantage over classical computers in approximating solutions to combinatorial optimization problems. Specifically, building on seminal work by Kearns and Valiant and introducing a new reduction, we identify special types of problems that are hard for classical computers to approximate up to polynomial factors. At the same time, we give a quantum algorithm that can efficiently approximate the optimal solution within a polynomial factor. The core of the quantum advantage discovered in this work is ultimately borrowed from Shor's quantum algorithm for factoring. Concretely, we prove a super-polynomial advantage for approximating special instances of the so-called integer programming problem. In doing so, we provide an explicit end-to-end construction for advantage bearing instances. This result shows that quantum devices have, in principle, the power to approximate combinatorial optimization solutions beyond the reach of classical efficient algorithms. Our results also give clear guidance on how to construct such advantage-bearing problem instances.

It is well-known that digital signatures can be constructed from one-way functions in a black-box way. While one-way functions are essentially the minimal assumption in classical cryptography, this is not the case in the quantum setting. A variety of qualitatively weaker and inherently quantum assumptions (e.g. EFI pairs, one-way state generators, and pseudorandom states) are known to be sufficient for non-trivial quantum cryptography. While it is known that commitments, zero-knowledge proofs, and even multiparty computation can be constructed from these assumptions, it has remained an open question whether the same is true for quantum digital signatures schemes (QDS). In this work, we show that there $\textit{does not}$ exist a black-box construction of a QDS scheme with classical signatures from pseudorandom states with linear, or greater, output length. Our result complements that of Morimae and Yamakawa (2022), who described a $\textit{one-time}$ secure QDS scheme with classical signatures, but left open the question of constructing a standard $\textit{multi-time}$ secure one.

Consistency models, which were proposed to mitigate the high computational overhead during the sampling phase of diffusion models, facilitate single-step sampling while attaining state-of-the-art empirical performance. When integrated into the training phase, consistency models attempt to train a sequence of consistency functions capable of mapping any point at any time step of the diffusion process to its starting point. Despite the empirical success, a comprehensive theoretical understanding of consistency training remains elusive. This paper takes a first step towards establishing theoretical underpinnings for consistency models. We demonstrate that, in order to generate samples within $\varepsilon$ proximity to the target in distribution (measured by some Wasserstein metric), it suffices for the number of steps in consistency learning to exceed the order of $d^{5/2}/\varepsilon$, with $d$ the data dimension. Our theory offers rigorous insights into the validity and efficacy of consistency models, illuminating their utility in downstream inference tasks.

The dynamic mode decomposition (DMD) is a simple and powerful data-driven modeling technique that is capable of revealing coherent spatiotemporal patterns from data. The method's linear algebra-based formulation additionally allows for a variety of optimizations and extensions that make the algorithm practical and viable for real-world data analysis. As a result, DMD has grown to become a leading method for dynamical system analysis across multiple scientific disciplines. PyDMD is a Python package that implements DMD and several of its major variants. In this work, we expand the PyDMD package to include a number of cutting-edge DMD methods and tools specifically designed to handle dynamics that are noisy, multiscale, parameterized, prohibitively high-dimensional, or even strongly nonlinear. We provide a complete overview of the features available in PyDMD as of version 1.0, along with a brief overview of the theory behind the DMD algorithm, information for developers, tips regarding practical DMD usage, and introductory coding examples. All code is available at //github.com/PyDMD/PyDMD .

The evaluation of text-generative vision-language models is a challenging yet crucial endeavor. By addressing the limitations of existing Visual Question Answering (VQA) benchmarks and proposing innovative evaluation methodologies, our research seeks to advance our understanding of these models' capabilities. We propose a novel VQA benchmark based on well-known visual classification datasets which allows a granular evaluation of text-generative vision-language models and their comparison with discriminative vision-language models. To improve the assessment of coarse answers on fine-grained classification tasks, we suggest using the semantic hierarchy of the label space to ask automatically generated follow-up questions about the ground-truth category. Finally, we compare traditional NLP and LLM-based metrics for the problem of evaluating model predictions given ground-truth answers. We perform a human evaluation study upon which we base our decision on the final metric. We apply our benchmark to a suite of vision-language models and show a detailed comparison of their abilities on object, action, and attribute classification. Our contributions aim to lay the foundation for more precise and meaningful assessments, facilitating targeted progress in the exciting field of vision-language modeling.

Mendelian randomization (MR) is an instrumental variable (IV) approach to infer causal relationships between exposures and outcomes with genome-wide association studies (GWAS) summary data. However, the multivariable inverse-variance weighting (IVW) approach, which serves as the foundation for most MR approaches, cannot yield unbiased causal effect estimates in the presence of many weak IVs. To address this problem, we proposed the MR using Bias-corrected Estimating Equation (MRBEE) that can infer unbiased causal relationships with many weak IVs and account for horizontal pleiotropy simultaneously. While the practical significance of MRBEE was demonstrated in our parallel work (Lorincz-Comi (2023)), this paper established the statistical theories of multivariable IVW and MRBEE with many weak IVs. First, we showed that the bias of the multivariable IVW estimate is caused by the error-in-variable bias, whose scale and direction are inflated and influenced by weak instrument bias and sample overlaps of exposures and outcome GWAS cohorts, respectively. Second, we investigated the asymptotic properties of multivariable IVW and MRBEE, showing that MRBEE outperforms multivariable IVW regarding unbiasedness of causal effect estimation and asymptotic validity of causal inference. Finally, we applied MRBEE to examine myopia and revealed that education and outdoor activity are causal to myopia whereas indoor activity is not.

Limited amount of data and data sharing restrictions, due to GDPR compliance, constitute two common factors leading to reduced availability and accessibility when referring to medical data. To tackle these issues, we introduce the technique of Learning Using Privileged Information. Aiming to substantiate the idea, we attempt to build a robust model that improves the segmentation quality of tumors on digital mammograms, by gaining privileged information knowledge during the training procedure. Towards this direction, a baseline model, called student, is trained on patches extracted from the original mammograms, while an auxiliary model with the same architecture, called teacher, is trained on the corresponding enhanced patches accessing, in this way, privileged information. We repeat the student training procedure by providing the assistance of the teacher model this time. According to the experimental results, it seems that the proposed methodology performs better in the most of the cases and it can achieve 10% higher F1 score in comparison with the baseline.

Polysomnography (PSG) data is recorded and stored in various formats depending on the recording software. Although the PSG data can usually be exported to open formats, such as the European Data Format (EDF), they are limited in data types, validation, and readability. Moreover, the exported data is not harmonized, which means different datasets need customized preprocessing to conduct research on multiple datasets. In this work, we designed and implemented an open format for storage and processing of PSG data, called the Sleeplab format (SLF), which is both human and machine-readable, and has built-in validation of both data types and structures. SLF provides tools for reading, writing, and compression of the PSG datasets. In addition, SLF promotes harmonization of data from different sources, which reduces the amount of work needed to apply the same analytics pipelines to different datasets. SLF is interoperable as it utilizes the file system and commonly used file formats to store the data. The goal of developing SLF was to enable fast exploration and experimentation on PSG data, and to streamline the workflow of building analytics and machine learning applications that combine PSG data from multiple sources. The performance of SLF was tested with two open datasets of different formats (EDF and HDF5). SLF is fully open source and available at //github.com/UEF-SmartSleepLab/sleeplab-format.

In large-scale systems there are fundamental challenges when centralised techniques are used for task allocation. The number of interactions is limited by resource constraints such as on computation, storage, and network communication. We can increase scalability by implementing the system as a distributed task-allocation system, sharing tasks across many agents. However, this also increases the resource cost of communications and synchronisation, and is difficult to scale. In this paper we present four algorithms to solve these problems. The combination of these algorithms enable each agent to improve their task allocation strategy through reinforcement learning, while changing how much they explore the system in response to how optimal they believe their current strategy is, given their past experience. We focus on distributed agent systems where the agents' behaviours are constrained by resource usage limits, limiting agents to local rather than system-wide knowledge. We evaluate these algorithms in a simulated environment where agents are given a task composed of multiple subtasks that must be allocated to other agents with differing capabilities, to then carry out those tasks. We also simulate real-life system effects such as networking instability. Our solution is shown to solve the task allocation problem to 6.7% of the theoretical optimal within the system configurations considered. It provides 5x better performance recovery over no-knowledge retention approaches when system connectivity is impacted, and is tested against systems up to 100 agents with less than a 9% impact on the algorithms' performance.