Ground-penetrating radar (GPR) has been used as a non-destructive tool for tree root inspection. Estimating root-related parameters from GPR radargrams greatly facilitates root health monitoring and imaging. However, the task of estimating root-related parameters is challenging as the root reflection is a complex function of multiple root parameters and root orientations. Existing methods can only estimate a single root parameter at a time without considering the influence of other parameters and root orientations, resulting in limited estimation accuracy under different root conditions. In addition, soil heterogeneity introduces clutter in GPR radargrams, making the data processing and interpretation even harder. To address these issues, a novel neural network architecture, called mask-guided multi-polarimetric integration neural network (MMI-Net), is proposed to automatically and simultaneously estimate multiple root-related parameters in heterogeneous soil environments. The MMI-Net includes two sub-networks: a MaskNet that predicts a mask to highlight the root reflection area to eliminate interfering environmental clutter, and a ParaNet that uses the predicted mask as guidance to integrate, extract, and emphasize informative features in multi-polarimetric radargrams for accurate estimation of five key root-related parameters. The parameters include the root depth, diameter, relative permittivity, horizontal and vertical orientation angles. Experimental results demonstrate that the proposed MMI-Net achieves high estimation accuracy in these root-related parameters. This is the first work that takes the combined contributions of root parameters and spatial orientations into account and simultaneously estimates multiple root-related parameters. The data and code implemented in the paper can be found at //haihan-sun.github.io/GPR.html.
Stochastic partial differential equations (SPDEs) are the mathematical tool of choice for modelling spatiotemporal PDE-dynamics under the influence of randomness. Based on the notion of mild solution of an SPDE, we introduce a novel neural architecture to learn solution operators of PDEs with (possibly stochastic) forcing from partially observed data. The proposed Neural SPDE model provides an extension to two popular classes of physics-inspired architectures. On the one hand, it extends Neural CDEs and variants -- continuous-time analogues of RNNs -- in that it is capable of processing incoming sequential information arriving irregularly in time and observed at arbitrary spatial resolutions. On the other hand, it extends Neural Operators -- generalizations of neural networks to model mappings between spaces of functions -- in that it can parameterize solution operators of SPDEs depending simultaneously on the initial condition and a realization of the driving noise. By performing operations in the spectral domain, we show how a Neural SPDE can be evaluated in two ways, either by calling an ODE solver (emulating a spectral Galerkin scheme), or by solving a fixed point problem. Experiments on various semilinear SPDEs, including the stochastic Navier-Stokes equations, demonstrate how the Neural SPDE model is capable of learning complex spatiotemporal dynamics in a resolution-invariant way, with better accuracy and lighter training data requirements compared to alternative models, and up to 3 orders of magnitude faster than traditional solvers.
Coflow is a network abstraction used to represent communication patterns in data centers. The coflow scheduling problem in large data centers is one of the most important $NP$-hard problems. Many previous studies on coflow scheduling mainly focus on the single-core model. However, with the growth of data centers, this single-core model is no longer sufficient. This paper considers the coflow scheduling problem in heterogeneous parallel networks. The heterogeneous parallel network is an architecture based on multiple network cores running in parallel. In this paper, two polynomial-time approximation algorithms are developed for scheduling divisible and indivisible coflows in heterogeneous parallel networks, respectively. Both algorithms achieve an approximation ratio of $O(\log m/ \log \log m)$ with arbitrary release times.
Accurate extraction of the Region of Interest is critical for successful ocular region-based biometrics. In this direction, we propose a new context-based segmentation approach, entitled Ocular Region Context Network (ORCNet), introducing a specific loss function, i.e., he Punish Context Loss (PC-Loss). The PC-Loss punishes the segmentation losses of a network by using a percentage difference value between the ground truth and the segmented masks. We obtain the percentage difference by taking into account Biederman's semantic relationship concepts, in which we use three contexts (semantic, spatial, and scale) to evaluate the relationships of the objects in an image. Our proposal achieved promising results in the evaluated scenarios: iris, sclera, and ALL (iris + sclera) segmentations, utperforming the literature baseline techniques. The ORCNet with ResNet-152 outperforms the best baseline (EncNet with ResNet-152) on average by 2.27%, 28.26% and 6.43% in terms of F-Score, Error Rate and Intersection Over Union, respectively. We also provide (for research purposes) 3,191 manually labeled masks for the MICHE-I database, as another contribution of our work.
We propose a novel federated learning paradigm to model data variability among heterogeneous clients in multi-centric studies. Our method is expressed through a hierarchical Bayesian latent variable model, where client-specific parameters are assumed to be realization from a global distribution at the master level, which is in turn estimated to account for data bias and variability across clients. We show that our framework can be effectively optimized through expectation maximization (EM) over latent master's distribution and clients' parameters. We also introduce formal differential privacy (DP) guarantees compatibly with our EM optimization scheme. We tested our method on the analysis of multi-modal medical imaging data and clinical scores from distributed clinical datasets of patients affected by Alzheimer's disease. We demonstrate that our method is robust when data is distributed either in iid and non-iid manners, even when local parameters perturbation is included to provide DP guarantees. Moreover, the variability of data, views and centers can be quantified in an interpretable manner, while guaranteeing high-quality data reconstruction as compared to state-of-the-art autoencoding models and federated learning schemes. The code is available at //gitlab.inria.fr/epione/federated-multi-views-ppca.
Equivariances provide useful inductive biases in neural network modeling, with the translation equivariance of convolutional neural networks being a canonical example. Equivariances can be embedded in architectures through weight-sharing and place symmetry constraints on the functions a neural network can represent. The type of symmetry is typically fixed and has to be chosen in advance. Although some tasks are inherently equivariant, many tasks do not strictly follow such symmetries. In such cases, equivariance constraints can be overly restrictive. In this work, we propose a parameter-efficient relaxation of equivariance that can effectively interpolate between a (i) non-equivariant linear product, (ii) a strict-equivariant convolution, and (iii) a strictly-invariant mapping. The proposed parameterization can be thought of as a building block to allow adjustable symmetry structure in neural networks. Compared to non-equivariant or strict-equivariant baselines, we experimentally verify that soft equivariance leads to improved performance in terms of test accuracy on CIFAR-10 and CIFAR-100 image classification tasks.
With the explosive growth of information technology, multi-view graph data have become increasingly prevalent and valuable. Most existing multi-view clustering techniques either focus on the scenario of multiple graphs or multi-view attributes. In this paper, we propose a generic framework to cluster multi-view attributed graph data. Specifically, inspired by the success of contrastive learning, we propose multi-view contrastive graph clustering (MCGC) method to learn a consensus graph since the original graph could be noisy or incomplete and is not directly applicable. Our method composes of two key steps: we first filter out the undesirable high-frequency noise while preserving the graph geometric features via graph filtering and obtain a smooth representation of nodes; we then learn a consensus graph regularized by graph contrastive loss. Results on several benchmark datasets show the superiority of our method with respect to state-of-the-art approaches. In particular, our simple approach outperforms existing deep learning-based methods.
Vast amount of data generated from networks of sensors, wearables, and the Internet of Things (IoT) devices underscores the need for advanced modeling techniques that leverage the spatio-temporal structure of decentralized data due to the need for edge computation and licensing (data access) issues. While federated learning (FL) has emerged as a framework for model training without requiring direct data sharing and exchange, effectively modeling the complex spatio-temporal dependencies to improve forecasting capabilities still remains an open problem. On the other hand, state-of-the-art spatio-temporal forecasting models assume unfettered access to the data, neglecting constraints on data sharing. To bridge this gap, we propose a federated spatio-temporal model -- Cross-Node Federated Graph Neural Network (CNFGNN) -- which explicitly encodes the underlying graph structure using graph neural network (GNN)-based architecture under the constraint of cross-node federated learning, which requires that data in a network of nodes is generated locally on each node and remains decentralized. CNFGNN operates by disentangling the temporal dynamics modeling on devices and spatial dynamics on the server, utilizing alternating optimization to reduce the communication cost, facilitating computations on the edge devices. Experiments on the traffic flow forecasting task show that CNFGNN achieves the best forecasting performance in both transductive and inductive learning settings with no extra computation cost on edge devices, while incurring modest communication cost.
Answering questions that require reading texts in an image is challenging for current models. One key difficulty of this task is that rare, polysemous, and ambiguous words frequently appear in images, e.g., names of places, products, and sports teams. To overcome this difficulty, only resorting to pre-trained word embedding models is far from enough. A desired model should utilize the rich information in multiple modalities of the image to help understand the meaning of scene texts, e.g., the prominent text on a bottle is most likely to be the brand. Following this idea, we propose a novel VQA approach, Multi-Modal Graph Neural Network (MM-GNN). It first represents an image as a graph consisting of three sub-graphs, depicting visual, semantic, and numeric modalities respectively. Then, we introduce three aggregators which guide the message passing from one graph to another to utilize the contexts in various modalities, so as to refine the features of nodes. The updated nodes have better features for the downstream question answering module. Experimental evaluations show that our MM-GNN represents the scene texts better and obviously facilitates the performances on two VQA tasks that require reading scene texts.
Recent years have witnessed the emerging success of graph neural networks (GNNs) for modeling structured data. However, most GNNs are designed for homogeneous graphs, in which all nodes and edges belong to the same types, making them infeasible to represent heterogeneous structures. In this paper, we present the Heterogeneous Graph Transformer (HGT) architecture for modeling Web-scale heterogeneous graphs. To model heterogeneity, we design node- and edge-type dependent parameters to characterize the heterogeneous attention over each edge, empowering HGT to maintain dedicated representations for different types of nodes and edges. To handle dynamic heterogeneous graphs, we introduce the relative temporal encoding technique into HGT, which is able to capture the dynamic structural dependency with arbitrary durations. To handle Web-scale graph data, we design the heterogeneous mini-batch graph sampling algorithm---HGSampling---for efficient and scalable training. Extensive experiments on the Open Academic Graph of 179 million nodes and 2 billion edges show that the proposed HGT model consistently outperforms all the state-of-the-art GNN baselines by 9%--21% on various downstream tasks.
Image segmentation is still an open problem especially when intensities of the interested objects are overlapped due to the presence of intensity inhomogeneity (also known as bias field). To segment images with intensity inhomogeneities, a bias correction embedded level set model is proposed where Inhomogeneities are Estimated by Orthogonal Primary Functions (IEOPF). In the proposed model, the smoothly varying bias is estimated by a linear combination of a given set of orthogonal primary functions. An inhomogeneous intensity clustering energy is then defined and membership functions of the clusters described by the level set function are introduced to rewrite the energy as a data term of the proposed model. Similar to popular level set methods, a regularization term and an arc length term are also included to regularize and smooth the level set function, respectively. The proposed model is then extended to multichannel and multiphase patterns to segment colourful images and images with multiple objects, respectively. It has been extensively tested on both synthetic and real images that are widely used in the literature and public BrainWeb and IBSR datasets. Experimental results and comparison with state-of-the-art methods demonstrate that advantages of the proposed model in terms of bias correction and segmentation accuracy.