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Bayesian Additive Regression Trees (BART) are a powerful semiparametric ensemble learning technique for modeling nonlinear regression functions. Although initially BART was proposed for predicting only continuous and binary response variables, over the years multiple extensions have emerged that are suitable for estimating a wider class of response variables (e.g. categorical and count data) in a multitude of application areas. In this paper we describe a Generalized framework for Bayesian trees and their additive ensembles where the response variable comes from an exponential family distribution and hence encompasses a majority of these variants of BART. We derive sufficient conditions on the response distribution, under which the posterior concentrates at a minimax rate, up to a logarithmic factor. In this regard our results provide theoretical justification for the empirical success of BART and its variants.

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This paper investigates the problem of simultaneously predicting multiple binary responses by utilizing a shared set of covariates. Our approach incorporates machine learning techniques for binary classification, without making assumptions about the underlying observations. Instead, our focus lies on a group of predictors, aiming to identify the one that minimizes prediction error. Unlike previous studies that primarily address estimation error, we directly analyze the prediction error of our method using PAC-Bayesian bounds techniques. In this paper, we introduce a pseudo-Bayesian approach capable of handling incomplete response data. Our strategy is efficiently implemented using the Langevin Monte Carlo method. Through simulation studies and a practical application using real data, we demonstrate the effectiveness of our proposed method, producing comparable or sometimes superior results compared to the current state-of-the-art method.

In this paper, we propose a model averaging approach for addressing model uncertainty in the context of partial linear functional additive models. These models are designed to describe the relation between a response and mixed-types of predictors by incorporating both the parametric effect of scalar variables and the additive effect of a functional variable. The proposed model averaging scheme assigns weights to candidate models based on the minimization of a multi-fold cross-validation criterion. Furthermore, we establish the asymptotic optimality of the resulting estimator in terms of achieving the lowest possible square prediction error loss under model misspecification. Extensive simulation studies and an application to a near infrared spectra dataset are presented to support and illustrate our method.

Parameter inference for ordinary differential equations (ODEs) is of fundamental importance in many scientific applications. While ODE solutions are typically approximated by deterministic algorithms, new research on probabilistic solvers indicates that they produce more reliable parameter estimates by better accounting for numerical errors. However, many ODE systems are highly sensitive to their parameter values. This produces deep local minima in the likelihood function -- a problem which existing probabilistic solvers have yet to resolve. Here, we show that a Bayesian filtering paradigm for probabilistic ODE solution can dramatically reduce sensitivity to parameters by learning from the noisy ODE observations in a data-adaptive manner. Our method is applicable to ODEs with partially unobserved components and with arbitrary non-Gaussian noise. Several examples demonstrate that it is more accurate than existing probabilistic ODE solvers, and even in some cases than the exact ODE likelihood.

We present an illustrative study in which we use a mixture of regressions model to improve on an ill-fitting simple linear regression model relating log brain mass to log body mass for 100 placental mammalian species. The slope of the model is of particular scientific interest because it corresponds to a constant that governs a hypothesized allometric power law relating brain mass to body mass. We model these data using an anchored Bayesian mixture of regressions model, which modifies the standard Bayesian Gaussian mixture by pre-assigning small subsets of observations to given mixture components with probability one. These observations (called anchor points) break the relabeling invariance (or label-switching) typical of exchangeable models. In the article, we develop a strategy for selecting anchor points using tools from case influence diagnostics. We compare the performance of three anchoring methodson the allometric data and in simulated settings.

This paper presents a novel approach to Bayesian nonparametric spectral analysis of stationary multivariate time series. Starting with a parametric vector-autoregressive model, the parametric likelihood is nonparametrically adjusted in the frequency domain to account for potential deviations from parametric assumptions. We show mutual contiguity of the nonparametrically corrected likelihood, the multivariate Whittle likelihood approximation and the exact likelihood for Gaussian time series. A multivariate extension of the nonparametric Bernstein-Dirichlet process prior for univariate spectral densities to the space of Hermitian positive definite spectral density matrices is specified directly on the correction matrices. An infinite series representation of this prior is then used to develop a Markov chain Monte Carlo algorithm to sample from the posterior distribution. The code is made publicly available for ease of use and reproducibility. With this novel approach we provide a generalization of the multivariate Whittle-likelihood-based method of Meier et al. (2020) as well as an extension of the nonparametrically corrected likelihood for univariate stationary time series of Kirch et al. (2019) to the multivariate case. We demonstrate that the nonparametrically corrected likelihood combines the efficiencies of a parametric with the robustness of a nonparametric model. Its numerical accuracy is illustrated in a comprehensive simulation study. We illustrate its practical advantages by a spectral analysis of two environmental time series data sets: a bivariate time series of the Southern Oscillation Index and fish recruitment and time series of windspeed data at six locations in California.

Demand for reliable statistics at a local area (small area) level has greatly increased in recent years. Traditional area-specific estimators based on probability samples are not adequate because of small sample size or even zero sample size in a local area. As a result, methods based on models linking the areas are widely used. World Bank focused on estimating poverty measures, in particular poverty incidence and poverty gap called FGT measures, using a simulated census method, called ELL, based on a one-fold nested error model for a suitable transformation of the welfare variable. Modified ELL methods leading to significant gain in efficiency over ELL also have been proposed under the one-fold model. An advantage of ELL and modified ELL methods is that distributional assumptions on the random effects in the model are not needed. In this paper, we extend ELL and modified ELL to two-fold nested error models to estimate poverty indicators for areas (say a state) and subareas (say counties within a state). Our simulation results indicate that the modified ELL estimators lead to large efficiency gains over ELL at the area level and subarea level. Further, modified ELL method retaining both area and subarea estimated effects in the model (called MELL2) performs significantly better in terms of mean squared error (MSE) for sampled subareas than the modified ELL retaining only estimated area effect in the model (called MELL1).

Quantification learning deals with the task of estimating the target label distribution under label shift. In this paper, we first present a unifying framework, distribution feature matching (DFM), that recovers as particular instances various estimators introduced in previous literature. We derive a general performance bound for DFM procedures, improving in several key aspects upon previous bounds derived in particular cases. We then extend this analysis to study robustness of DFM procedures in the misspecified setting under departure from the exact label shift hypothesis, in particular in the case of contamination of the target by an unknown distribution. These theoretical findings are confirmed by a detailed numerical study on simulated and real-world datasets. We also introduce an efficient, scalable and robust version of kernel-based DFM using the Random Fourier Feature principle.

In this paper we investigate panel regression models with interactive fixed effects. We propose two new estimation methods that are based on minimizing convex objective functions. The first method minimizes the sum of squared residuals with a nuclear (trace) norm regularization. The second method minimizes the nuclear norm of the residuals. We establish the consistency of the two resulting estimators. Those estimators have a very important computational advantage compared to the existing least squares (LS) estimator, in that they are defined as minimizers of a convex objective function. In addition, the nuclear norm penalization helps to resolve a potential identification problem for interactive fixed effect models, in particular when the regressors are low-rank and the number of the factors is unknown. We also show how to construct estimators that are asymptotically equivalent to the least squares (LS) estimator in Bai (2009) and Moon and Weidner (2017) by using our nuclear norm regularized or minimized estimators as initial values for a finite number of LS minimizing iteration steps. This iteration avoids any non-convex minimization, while the original LS estimation problem is generally non-convex, and can have multiple local minima.

Dynamic Linear Models (DLMs) are commonly employed for time series analysis due to their versatile structure, simple recursive updating, ability to handle missing data, and probabilistic forecasting. However, the options for count time series are limited: Gaussian DLMs require continuous data, while Poisson-based alternatives often lack sufficient modeling flexibility. We introduce a novel semiparametric methodology for count time series by warping a Gaussian DLM. The warping function has two components: a (nonparametric) transformation operator that provides distributional flexibility and a rounding operator that ensures the correct support for the discrete data-generating process. We develop conjugate inference for the warped DLM, which enables analytic and recursive updates for the state space filtering and smoothing distributions. We leverage these results to produce customized and efficient algorithms for inference and forecasting, including Monte Carlo simulation for offline analysis and an optimal particle filter for online inference. This framework unifies and extends a variety of discrete time series models and is valid for natural counts, rounded values, and multivariate observations. Simulation studies illustrate the excellent forecasting capabilities of the warped DLM. The proposed approach is applied to a multivariate time series of daily overdose counts and demonstrates both modeling and computational successes.

This paper focuses on the expected difference in borrower's repayment when there is a change in the lender's credit decisions. Classical estimators overlook the confounding effects and hence the estimation error can be magnificent. As such, we propose another approach to construct the estimators such that the error can be greatly reduced. The proposed estimators are shown to be unbiased, consistent, and robust through a combination of theoretical analysis and numerical testing. Moreover, we compare the power of estimating the causal quantities between the classical estimators and the proposed estimators. The comparison is tested across a wide range of models, including linear regression models, tree-based models, and neural network-based models, under different simulated datasets that exhibit different levels of causality, different degrees of nonlinearity, and different distributional properties. Most importantly, we apply our approaches to a large observational dataset provided by a global technology firm that operates in both the e-commerce and the lending business. We find that the relative reduction of estimation error is strikingly substantial if the causal effects are accounted for correctly.

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