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In this article, we consider change point inference for high dimensional linear models. For change point detection, given any subgroup of variables, we propose a new method for testing the homogeneity of corresponding regression coefficients across the observations. Under some regularity conditions, the proposed new testing procedure controls the type I error asymptotically and is powerful against sparse alternatives and enjoys certain optimality. For change point identification, an argmax based change point estimator is proposed which is shown to be consistent for the true change point location. Moreover, combining with the binary segmentation technique, we further extend our new method for detecting and identifying multiple change points. Extensive numerical studies justify the validity of our new method and an application to the Alzheimer's disease data analysis further demonstrate its competitive performance.

Generative models of observations under interventions have been a vibrant topic of interest across machine learning and the sciences in recent years. For example, in drug discovery, there is a need to model the effects of diverse interventions on cells in order to characterize unknown biological mechanisms of action. We propose the Sparse Additive Mechanism Shift Variational Autoencoder, SAMS-VAE, to combine compositionality, disentanglement, and interpretability for perturbation models. SAMS-VAE models the latent state of a perturbed sample as the sum of a local latent variable capturing sample-specific variation and sparse global variables of latent intervention effects. Crucially, SAMS-VAE sparsifies these global latent variables for individual perturbations to identify disentangled, perturbation-specific latent subspaces that are flexibly composable. We evaluate SAMS-VAE both quantitatively and qualitatively on a range of tasks using two popular single cell sequencing datasets. In order to measure perturbation-specific model-properties, we also introduce a framework for evaluation of perturbation models based on average treatment effects with links to posterior predictive checks. SAMS-VAE outperforms comparable models in terms of generalization across in-distribution and out-of-distribution tasks, including a combinatorial reasoning task under resource paucity, and yields interpretable latent structures which correlate strongly to known biological mechanisms. Our results suggest SAMS-VAE is an interesting addition to the modeling toolkit for machine learning-driven scientific discovery.

In this paper, we use a linear programming (LP) optimization approach to evaluate the equivocation for a wiretap channel where the main channel is noiseless, and the wiretap channel is a binary symmetric channel (BSC). Using this technique, we present an analytical limit for the achievable secrecy rate in the finite blocklength regime that is tighter than traditional fundamental limits. We also propose a secrecy coding technique that outperforms random binning codes. When there is one overhead bit, this coding technique is optimum and achieves the analytical limit. For cases with additional bits of overhead, our coding scheme can achieve equivocation rates close to the new limit. Furthermore, we evaluate the patterns of the generator matrix and the parity-check matrix for linear codes and we present binning techniques for both linear and non-linear codes using two different approaches: recursive and non-recursive. To our knowledge, this is the first optimization solution for secrecy coding obtained through linear programming.

In this paper, we consider multivariate functional time series with a two-way dependence structure: a serial dependence across time points and a graphical interaction among the multiple functions within each time point. We develop the notion of dynamic weak separability, a more general condition than those assumed in literature, and use it to characterize the two-way structure in multivariate functional time series. Based on the proposed weak separability, we develop a unified framework for functional graphical models and dynamic principal component analysis, and further extend it to optimally reconstruct signals from contaminated functional data using graphical-level information. We investigate asymptotic properties of the resulting estimators and illustrate the effectiveness of our proposed approach through extensive simulations. We apply our method to hourly air pollution data that were collected from a monitoring network in China.

Product states, unentangled tensor products of single qubits, are a ubiquitous ansatz in quantum computation, including for state-of-the-art Hamiltonian approximation algorithms. A natural question is whether we should expect to efficiently solve product state problems on any interesting families of Hamiltonians. We completely classify the complexity of finding minimum-energy product states for Hamiltonians defined by any fixed set of allowed 2-qubit interactions. Our results follow a line of work classifying the complexity of solving Hamiltonian problems and classical constraint satisfaction problems based on the allowed constraints. We prove that estimating the minimum energy of a product state is in P if and only if all allowed interactions are 1-local, and NP-complete otherwise. Equivalently, any family of non-trivial two-body interactions generates Hamiltonians with NP-complete product-state problems. Our hardness constructions only require coupling strengths of constant magnitude. A crucial component of our proofs is a collection of hardness results for a new variant of the Vector Max-Cut problem, which should be of independent interest. Our definition involves sums of distances rather than squared distances and allows linear stretches. A corollary of our classification is a new proof that optimizing product states in the Quantum Max-Cut model (the quantum Heisenberg model) is NP-complete.

While significant advancements have been made in the field of fair machine learning, the majority of studies focus on scenarios where the decision model operates on a static population. In this paper, we study fairness in dynamic systems where sequential decisions are made. Each decision may shift the underlying distribution of features or user behavior. We model the dynamic system through a Markov Decision Process (MDP). By acknowledging that traditional fairness notions and long-term fairness are distinct requirements that may not necessarily align with one another, we propose an algorithmic framework to integrate various fairness considerations with reinforcement learning using both pre-processing and in-processing approaches. Three case studies show that our method can strike a balance between traditional fairness notions, long-term fairness, and utility.

In this work, simulation-based equations to calculate propagation constant in uniform or periodic structures (SES) are deduced and verified through simulations in various types of structures. The modeling of those structures are essentially based on field distributions from a driven-mode solver, and the field distributions are used as the input parameters of the FPPS. It allows the separation of forward and backward waves from a total wave inside such a uniform or periodic structure, and thus it can be used to calculate the propagation constants inside both uniform and periodic structures even with a strong reflection. In order to test the performance and function of the FPPS, it has been applied to a variety of typical structures, including uniform waveguides, lossfree closed structures, lossy closed structures, and open radiation structures, and compared with the results of eigenmode solvers, equivalent network methods, and spectral domain integral equation methods. The comparison shows the easy-to-use and adaptable nature of the FPPS. the FPPS. This FPPS could be also applied to open radiating structures, and even multi-dimensional periodic/uniform structures.

In this paper, we tackle two challenges in multimodal learning for visual recognition: 1) when missing-modality occurs either during training or testing in real-world situations; and 2) when the computation resources are not available to finetune on heavy transformer models. To this end, we propose to utilize prompt learning and mitigate the above two challenges together. Specifically, our modality-missing-aware prompts can be plugged into multimodal transformers to handle general missing-modality cases, while only requiring less than 1% learnable parameters compared to training the entire model. We further explore the effect of different prompt configurations and analyze the robustness to missing modality. Extensive experiments are conducted to show the effectiveness of our prompt learning framework that improves the performance under various missing-modality cases, while alleviating the requirement of heavy model re-training. Code is available.

Over the past few years, we have seen fundamental breakthroughs in core problems in machine learning, largely driven by advances in deep neural networks. At the same time, the amount of data collected in a wide array of scientific domains is dramatically increasing in both size and complexity. Taken together, this suggests many exciting opportunities for deep learning applications in scientific settings. But a significant challenge to this is simply knowing where to start. The sheer breadth and diversity of different deep learning techniques makes it difficult to determine what scientific problems might be most amenable to these methods, or which specific combination of methods might offer the most promising first approach. In this survey, we focus on addressing this central issue, providing an overview of many widely used deep learning models, spanning visual, sequential and graph structured data, associated tasks and different training methods, along with techniques to use deep learning with less data and better interpret these complex models --- two central considerations for many scientific use cases. We also include overviews of the full design process, implementation tips, and links to a plethora of tutorials, research summaries and open-sourced deep learning pipelines and pretrained models, developed by the community. We hope that this survey will help accelerate the use of deep learning across different scientific domains.

Machine learning techniques have deeply rooted in our everyday life. However, since it is knowledge- and labor-intensive to pursue good learning performance, human experts are heavily involved in every aspect of machine learning. In order to make machine learning techniques easier to apply and reduce the demand for experienced human experts, automated machine learning (AutoML) has emerged as a hot topic with both industrial and academic interest. In this paper, we provide an up to date survey on AutoML. First, we introduce and define the AutoML problem, with inspiration from both realms of automation and machine learning. Then, we propose a general AutoML framework that not only covers most existing approaches to date but also can guide the design for new methods. Subsequently, we categorize and review the existing works from two aspects, i.e., the problem setup and the employed techniques. Finally, we provide a detailed analysis of AutoML approaches and explain the reasons underneath their successful applications. We hope this survey can serve as not only an insightful guideline for AutoML beginners but also an inspiration for future research.