The heterogeneous computing paradigm has led to the need for portable and efficient programming solutions that can leverage the capabilities of various hardware devices, such as NVIDIA, Intel, and AMD GPUs. This study evaluates the portability and performance of the SYCL and CUDA languages for one fundamental bioinformatics application (Smith-Waterman protein database search) across different GPU architectures, considering single and multi-GPU configurations from different vendors. The experimental work showed that, while both CUDA and SYCL versions achieve similar performance on NVIDIA devices, the latter demonstrated remarkable code portability to other GPU architectures, such as AMD and Intel. Furthermore, the architectural efficiency rates achieved on these devices were superior in 3 of the 4 cases tested. This brief study highlights the potential of SYCL as a viable solution for achieving both performance and portability in the heterogeneous computing ecosystem.
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Recently, intelligent reflecting surface (IRS)-aided millimeter-wave (mmWave) and terahertz (THz) communications are considered in the wireless community. This paper aims to design a beam-based multiple-access strategy for this new paradigm. Its key idea is to make use of multiple sub-arrays over a hybrid digital-analog array to form independent beams, each of which is steered towards the desired direction to mitigate inter-user interference and suppress unwanted signal reflection. The proposed scheme combines the advantages of both orthogonal multiple access (i.e., no inter-user interference) and non-orthogonal multiple access (i.e., full time-frequency resource use). Consequently, it can substantially boost the system capacity, as verified by Monte-Carlo simulations.
Age of Information (AoI) has been proposed to quantify the freshness of information for emerging real-time applications such as remote monitoring and control in wireless networked control systems (WNCSs). Minimization of the average AoI and its outage probability can ensure timely and stable transmission. Energy efficiency (EE) also plays an important role in WNCSs, as many devices are featured by low cost and limited battery. Multi-connectivity over multiple links enables a decrease in AoI, at the cost of energy. We tackle the unresolved problem of selecting the optimal number of connections that is both AoI-optimal and energy-efficient, while avoiding risky states. To address this issue, the average AoI and peak AoI (PAoI), as well as PAoI violation probability are formulated as functions of the number of connections. Then the EE-PAoI ratio is introduced to allow a tradeoff between AoI and energy, which is maximized by the proposed risk-aware, AoI-optimal and energy-efficient connectivity scheme. To obtain this, we analyze the property of the formulated EE-PAoI ratio and prove the monotonicity of PAoI violation probability. Interestingly, we reveal that the multi-connectivity scheme is not always preferable, and the signal-to-noise ratio (SNR) threshold that determines the selection of the multi-connectivity scheme is derived as a function of the coding rate. Also, the optimal number of connections is obtained and shown to be a decreasing function of the transmit power. Simulation results demonstrate that the proposed scheme enables more than 15 folds of EE-PAoI gain at the low SNR than the single-connectivity scheme.
We introduce a graph-aware autoencoder ensemble framework, with associated formalisms and tooling, designed to facilitate deep learning for scholarship in the humanities. By composing sub-architectures to produce a model isomorphic to a humanistic domain we maintain interpretability while providing function signatures for each sub-architectural choice, allowing both traditional and computational researchers to collaborate without disrupting established practices. We illustrate a practical application of our approach to a historical study of the American post-Atlantic slave trade, and make several specific technical contributions: a novel hybrid graph-convolutional autoencoder mechanism, batching policies for common graph topologies, and masking techniques for particular use-cases. The effectiveness of the framework for broadening participation of diverse domains is demonstrated by a growing suite of two dozen studies, both collaborations with humanists and established tasks from machine learning literature, spanning a variety of fields and data modalities. We make performance comparisons of several different architectural choices and conclude with an ambitious list of imminent next steps for this research.
Security resources are scarce, and practitioners need guidance in the effective and efficient usage of techniques and tools available in the cybersecurity industry. Two emerging tool types, Interactive Application Security Testing (IAST) and Runtime Application Self-Protection (RASP), have not been thoroughly evaluated against well-established counterparts such as Dynamic Application Security Testing (DAST) and Static Application Security Testing (SAST). The goal of this research is to aid practitioners in making informed choices about the use of Interactive Application Security Testing (IAST) and Runtime Application Self-Protection (RASP) tools through an analysis of their effectiveness and efficiency in comparison with different vulnerability detection and prevention techniques and tools. We apply IAST and RASP on OpenMRS, an open-source Java-based online application. We compare the efficiency and effectiveness of IAST and RASP with techniques applied on OpenMRS in prior work. We measure efficiency and effectiveness in terms of the number and type of vulnerabilities detected and prevented per hour. Our study shows IAST performed relatively well compared to other techniques, performing second-best in both efficiency and effectiveness. IAST detected eight Top-10 OWASP security risks compared to nine by SMPT and seven for EMPT, DAST, and SAST. IAST found more vulnerabilities than SMPT. The efficiency of IAST (2.14 VpH) is second to only EMPT (2.22 VpH). These findings imply that our study benefited from using IAST when conducting black-box security testing. In the context of a large, enterprise-scale web application such as OpenMRS, RASP does not replace vulnerability detection, while IAST is a powerful tool that complements other techniques.
Feature attribution methods highlight the important input tokens as explanations to model predictions, which have been widely applied to deep neural networks towards trustworthy AI. However, recent works show that explanations provided by these methods face challenges of being faithful and robust. In this paper, we propose a method with Robustness improvement and Explanation Guided training towards more faithful EXplanations (REGEX) for text classification. First, we improve model robustness by input gradient regularization technique and virtual adversarial training. Secondly, we use salient ranking to mask noisy tokens and maximize the similarity between model attention and feature attribution, which can be seen as a self-training procedure without importing other external information. We conduct extensive experiments on six datasets with five attribution methods, and also evaluate the faithfulness in the out-of-domain setting. The results show that REGEX improves fidelity metrics of explanations in all settings and further achieves consistent gains based on two randomization tests. Moreover, we show that using highlight explanations produced by REGEX to train select-then-predict models results in comparable task performance to the end-to-end method.
With the advances of data-driven machine learning research, a wide variety of prediction problems have been tackled. It has become critical to explore how machine learning and specifically deep learning methods can be exploited to analyse healthcare data. A major limitation of existing methods has been the focus on grid-like data; however, the structure of physiological recordings are often irregular and unordered which makes it difficult to conceptualise them as a matrix. As such, graph neural networks have attracted significant attention by exploiting implicit information that resides in a biological system, with interactive nodes connected by edges whose weights can be either temporal associations or anatomical junctions. In this survey, we thoroughly review the different types of graph architectures and their applications in healthcare. We provide an overview of these methods in a systematic manner, organized by their domain of application including functional connectivity, anatomical structure and electrical-based analysis. We also outline the limitations of existing techniques and discuss potential directions for future research.
Aiming at expanding few-shot relations' coverage in knowledge graphs (KGs), few-shot knowledge graph completion (FKGC) has recently gained more research interests. Some existing models employ a few-shot relation's multi-hop neighbor information to enhance its semantic representation. However, noise neighbor information might be amplified when the neighborhood is excessively sparse and no neighbor is available to represent the few-shot relation. Moreover, modeling and inferring complex relations of one-to-many (1-N), many-to-one (N-1), and many-to-many (N-N) by previous knowledge graph completion approaches requires high model complexity and a large amount of training instances. Thus, inferring complex relations in the few-shot scenario is difficult for FKGC models due to limited training instances. In this paper, we propose a few-shot relational learning with global-local framework to address the above issues. At the global stage, a novel gated and attentive neighbor aggregator is built for accurately integrating the semantics of a few-shot relation's neighborhood, which helps filtering the noise neighbors even if a KG contains extremely sparse neighborhoods. For the local stage, a meta-learning based TransH (MTransH) method is designed to model complex relations and train our model in a few-shot learning fashion. Extensive experiments show that our model outperforms the state-of-the-art FKGC approaches on the frequently-used benchmark datasets NELL-One and Wiki-One. Compared with the strong baseline model MetaR, our model achieves 5-shot FKGC performance improvements of 8.0% on NELL-One and 2.8% on Wiki-One by the metric Hits@10.
Answering questions that require reading texts in an image is challenging for current models. One key difficulty of this task is that rare, polysemous, and ambiguous words frequently appear in images, e.g., names of places, products, and sports teams. To overcome this difficulty, only resorting to pre-trained word embedding models is far from enough. A desired model should utilize the rich information in multiple modalities of the image to help understand the meaning of scene texts, e.g., the prominent text on a bottle is most likely to be the brand. Following this idea, we propose a novel VQA approach, Multi-Modal Graph Neural Network (MM-GNN). It first represents an image as a graph consisting of three sub-graphs, depicting visual, semantic, and numeric modalities respectively. Then, we introduce three aggregators which guide the message passing from one graph to another to utilize the contexts in various modalities, so as to refine the features of nodes. The updated nodes have better features for the downstream question answering module. Experimental evaluations show that our MM-GNN represents the scene texts better and obviously facilitates the performances on two VQA tasks that require reading scene texts.
Deep neural networks (DNNs) are successful in many computer vision tasks. However, the most accurate DNNs require millions of parameters and operations, making them energy, computation and memory intensive. This impedes the deployment of large DNNs in low-power devices with limited compute resources. Recent research improves DNN models by reducing the memory requirement, energy consumption, and number of operations without significantly decreasing the accuracy. This paper surveys the progress of low-power deep learning and computer vision, specifically in regards to inference, and discusses the methods for compacting and accelerating DNN models. The techniques can be divided into four major categories: (1) parameter quantization and pruning, (2) compressed convolutional filters and matrix factorization, (3) network architecture search, and (4) knowledge distillation. We analyze the accuracy, advantages, disadvantages, and potential solutions to the problems with the techniques in each category. We also discuss new evaluation metrics as a guideline for future research.
Top-down visual attention mechanisms have been used extensively in image captioning and visual question answering (VQA) to enable deeper image understanding through fine-grained analysis and even multiple steps of reasoning. In this work, we propose a combined bottom-up and top-down attention mechanism that enables attention to be calculated at the level of objects and other salient image regions. This is the natural basis for attention to be considered. Within our approach, the bottom-up mechanism (based on Faster R-CNN) proposes image regions, each with an associated feature vector, while the top-down mechanism determines feature weightings. Applying this approach to image captioning, our results on the MSCOCO test server establish a new state-of-the-art for the task, achieving CIDEr / SPICE / BLEU-4 scores of 117.9, 21.5 and 36.9, respectively. Demonstrating the broad applicability of the method, applying the same approach to VQA we obtain first place in the 2017 VQA Challenge.
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