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The case-cohort study design bypasses resource constraints by collecting certain expensive covariates for only a small subset of the full cohort. Weighted Cox regression is the most widely used approach for analysing case-cohort data within the Cox model, but is inefficient. Alternative approaches based on multiple imputation and nonparametric maximum likelihood suffer from incompatibility and computational issues respectively. We introduce a novel Bayesian framework for case-cohort Cox regression that avoids the aforementioned problems. Users can include auxiliary variables to help predict the unmeasured expensive covariates with a prediction model of their choice, while the models for the nuisance parameters are nonparametrically specified and integrated out. Posterior sampling can be carried out using procedures based on the pseudo-marginal MCMC algorithm. The method scales effectively to large, complex datasets, as demonstrated in our application: investigating the associations between saturated fatty acids and type 2 diabetes using the EPIC-Norfolk study. As part of our analysis, we also develop a new approach for handling compositional data in the Cox model, leading to more reliable and interpretable results compared to previous studies. The performance of our method is illustrated with extensive simulations. The code used to produce the results in this paper can be found at //github.com/andrewyiu/bayes_cc .

In the context of right-censored and interval-censored data we develop asymptotic formulas to compute pseudo-observations for the survival function and the Restricted Mean Survival Time (RMST). Those formulas are based on the original estimators and do not involve computation of the jackknife estimators. For right-censored data, Von Mises expansions of the Kaplan-Meier estimator are used to derive the pseudo-observations. For interval censored data, a general class of parametric models for the survival function is studied. An asymptotic representation of the pseudo-observations is derived involving the Hessian matrix and the score vector of the density. The formula is illustrated on the piecewise-constant hazard model for the RMST. The proposed approximations are extremely accurate, even for small sample sizes, as illustrated on Monte-Carlo simulations and real data. We also study the gain in terms of computation time, as compared to the original jackknife method, which can be substantial for large dataset.

While deep neural networks have achieved remarkable success in various computer vision tasks, they often fail to generalize to new domains and subtle variations of input images. Several defenses have been proposed to improve the robustness against these variations. However, current defenses can only withstand the specific attack used in training, and the models often remain vulnerable to other input variations. Moreover, these methods often degrade performance of the model on clean images and do not generalize to out-of-domain samples. In this paper we present Generative Adversarial Training, an approach to simultaneously improve the model's generalization to the test set and out-of-domain samples as well as its robustness to unseen adversarial attacks. Instead of altering a low-level pre-defined aspect of images, we generate a spectrum of low-level, mid-level and high-level changes using generative models with a disentangled latent space. Adversarial training with these examples enable the model to withstand a wide range of attacks by observing a variety of input alterations during training. We show that our approach not only improves performance of the model on clean images and out-of-domain samples but also makes it robust against unforeseen attacks and outperforms prior work. We validate effectiveness of our method by demonstrating results on various tasks such as classification, segmentation and object detection.

The dominating NLP paradigm of training a strong neural predictor to perform one task on a specific dataset has led to state-of-the-art performance in a variety of applications (eg. sentiment classification, span-prediction based question answering or machine translation). However, it builds upon the assumption that the data distribution is stationary, ie. that the data is sampled from a fixed distribution both at training and test time. This way of training is inconsistent with how we as humans are able to learn from and operate within a constantly changing stream of information. Moreover, it is ill-adapted to real-world use cases where the data distribution is expected to shift over the course of a model's lifetime. The first goal of this thesis is to characterize the different forms this shift can take in the context of natural language processing, and propose benchmarks and evaluation metrics to measure its effect on current deep learning architectures. We then proceed to take steps to mitigate the effect of distributional shift on NLP models. To this end, we develop methods based on parametric reformulations of the distributionally robust optimization framework. Empirically, we demonstrate that these approaches yield more robust models as demonstrated on a selection of realistic problems. In the third and final part of this thesis, we explore ways of efficiently adapting existing models to new domains or tasks. Our contribution to this topic takes inspiration from information geometry to derive a new gradient update rule which alleviate catastrophic forgetting issues during adaptation.

Despite pre-trained language models have proven useful for learning high-quality semantic representations, these models are still vulnerable to simple perturbations. Recent works aimed to improve the robustness of pre-trained models mainly focus on adversarial training from perturbed examples with similar semantics, neglecting the utilization of different or even opposite semantics. Different from the image processing field, the text is discrete and few word substitutions can cause significant semantic changes. To study the impact of semantics caused by small perturbations, we conduct a series of pilot experiments and surprisingly find that adversarial training is useless or even harmful for the model to detect these semantic changes. To address this problem, we propose Contrastive Learning with semantIc Negative Examples (CLINE), which constructs semantic negative examples unsupervised to improve the robustness under semantically adversarial attacking. By comparing with similar and opposite semantic examples, the model can effectively perceive the semantic changes caused by small perturbations. Empirical results show that our approach yields substantial improvements on a range of sentiment analysis, reasoning, and reading comprehension tasks. And CLINE also ensures the compactness within the same semantics and separability across different semantics in sentence-level.

We consider the question: how can you sample good negative examples for contrastive learning? We argue that, as with metric learning, learning contrastive representations benefits from hard negative samples (i.e., points that are difficult to distinguish from an anchor point). The key challenge toward using hard negatives is that contrastive methods must remain unsupervised, making it infeasible to adopt existing negative sampling strategies that use label information. In response, we develop a new class of unsupervised methods for selecting hard negative samples where the user can control the amount of hardness. A limiting case of this sampling results in a representation that tightly clusters each class, and pushes different classes as far apart as possible. The proposed method improves downstream performance across multiple modalities, requires only few additional lines of code to implement, and introduces no computational overhead.

Current deep learning research is dominated by benchmark evaluation. A method is regarded as favorable if it empirically performs well on the dedicated test set. This mentality is seamlessly reflected in the resurfacing area of continual learning, where consecutively arriving sets of benchmark data are investigated. The core challenge is framed as protecting previously acquired representations from being catastrophically forgotten due to the iterative parameter updates. However, comparison of individual methods is nevertheless treated in isolation from real world application and typically judged by monitoring accumulated test set performance. The closed world assumption remains predominant. It is assumed that during deployment a model is guaranteed to encounter data that stems from the same distribution as used for training. This poses a massive challenge as neural networks are well known to provide overconfident false predictions on unknown instances and break down in the face of corrupted data. In this work we argue that notable lessons from open set recognition, the identification of statistically deviating data outside of the observed dataset, and the adjacent field of active learning, where data is incrementally queried such that the expected performance gain is maximized, are frequently overlooked in the deep learning era. Based on these forgotten lessons, we propose a consolidated view to bridge continual learning, active learning and open set recognition in deep neural networks. Our results show that this not only benefits each individual paradigm, but highlights the natural synergies in a common framework. We empirically demonstrate improvements when alleviating catastrophic forgetting, querying data in active learning, selecting task orders, while exhibiting robust open world application where previously proposed methods fail.

In information retrieval (IR) and related tasks, term weighting approaches typically consider the frequency of the term in the document and in the collection in order to compute a score reflecting the importance of the term for the document. In tasks characterized by the presence of training data (such as text classification) it seems logical that the term weighting function should take into account the distribution (as estimated from training data) of the term across the classes of interest. Although `supervised term weighting' approaches that use this intuition have been described before, they have failed to show consistent improvements. In this article we analyse the possible reasons for this failure, and call consolidated assumptions into question. Following this criticism we propose a novel supervised term weighting approach that, instead of relying on any predefined formula, learns a term weighting function optimised on the training set of interest; we dub this approach \emph{Learning to Weight} (LTW). The experiments that we run on several well-known benchmarks, and using different learning methods, show that our method outperforms previous term weighting approaches in text classification.

Generative Adversarial Networks (GANs) have recently achieved impressive results for many real-world applications, and many GAN variants have emerged with improvements in sample quality and training stability. However, they have not been well visualized or understood. How does a GAN represent our visual world internally? What causes the artifacts in GAN results? How do architectural choices affect GAN learning? Answering such questions could enable us to develop new insights and better models. In this work, we present an analytic framework to visualize and understand GANs at the unit-, object-, and scene-level. We first identify a group of interpretable units that are closely related to object concepts using a segmentation-based network dissection method. Then, we quantify the causal effect of interpretable units by measuring the ability of interventions to control objects in the output. We examine the contextual relationship between these units and their surroundings by inserting the discovered object concepts into new images. We show several practical applications enabled by our framework, from comparing internal representations across different layers, models, and datasets, to improving GANs by locating and removing artifact-causing units, to interactively manipulating objects in a scene. We provide open source interpretation tools to help researchers and practitioners better understand their GAN models.

Meta-learning enables a model to learn from very limited data to undertake a new task. In this paper, we study the general meta-learning with adversarial samples. We present a meta-learning algorithm, ADML (ADversarial Meta-Learner), which leverages clean and adversarial samples to optimize the initialization of a learning model in an adversarial manner. ADML leads to the following desirable properties: 1) it turns out to be very effective even in the cases with only clean samples; 2) it is model-agnostic, i.e., it is compatible with any learning model that can be trained with gradient descent; and most importantly, 3) it is robust to adversarial samples, i.e., unlike other meta-learning methods, it only leads to a minor performance degradation when there are adversarial samples. We show via extensive experiments that ADML delivers the state-of-the-art performance on two widely-used image datasets, MiniImageNet and CIFAR100, in terms of both accuracy and robustness.