With the growing imbalance between limited medical resources and escalating demands, AI-based clinical tasks have become paramount. Medication recommendation, as a sub-domain, aims to amalgamate longitudinal patient history with medical knowledge, assisting physicians in prescribing safer and more accurate medication combinations. Existing methods overlook the inherent long-tail distribution in medical data, lacking balanced representation between head and tail data, which leads to sub-optimal model performance. To address this challenge, we introduce StratMed, a model that incorporates an innovative relevance stratification mechanism. It harmonizes discrepancies in data long-tail distribution and strikes a balance between the safety and accuracy of medication combinations. Specifically, we first construct a pre-training method using deep learning networks to obtain entity representation. After that, we design a pyramid-like data stratification method to obtain more generalized entity relationships by reinforcing the features of unpopular entities. Based on this relationship, we designed two graph structures to express medication precision and safety at the same level to obtain visit representations. Finally, the patient's historical clinical information is fitted to generate medication combinations for the current health condition. Experiments on the MIMIC-III dataset demonstrate that our method has outperformed current state-of-the-art methods in four evaluation metrics (including safety and accuracy).
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A reasonable and balanced diet is essential for maintaining good health. With the advancements in deep learning, automated nutrition estimation method based on food images offers a promising solution for monitoring daily nutritional intake and promoting dietary health. While monocular image-based nutrition estimation is convenient, efficient, and economical, the challenge of limited accuracy remains a significant concern. To tackle this issue, we proposed DPF-Nutrition, an end-to-end nutrition estimation method using monocular images. In DPF-Nutrition, we introduced a depth prediction module to generate depth maps, thereby improving the accuracy of food portion estimation. Additionally, we designed an RGB-D fusion module that combined monocular images with the predicted depth information, resulting in better performance for nutrition estimation. To the best of our knowledge, this was the pioneering effort that integrated depth prediction and RGB-D fusion techniques in food nutrition estimation. Comprehensive experiments performed on Nutrition5k evaluated the effectiveness and efficiency of DPF-Nutrition.
Deep neural networks have become the method of choice for solving many image classification tasks, largely because they can fit very complex functions defined over raw images. The downside of such powerful learners is the danger of overfitting the training set, leading to poor generalization, which is usually avoided by regularization and "early stopping" of the training. In this paper, we propose a new deep network ensemble classifier that is very effective against overfit. We begin with the theoretical analysis of a regression model, whose predictions - that the variance among classifiers increases when overfit occurs - is demonstrated empirically in deep networks in common use. Guided by these results, we construct a new ensemble-based prediction method designed to combat overfit, where the prediction is determined by the most consensual prediction throughout the training. On multiple image and text classification datasets, we show that when regular ensembles suffer from overfit, our method eliminates the harmful reduction in generalization due to overfit, and often even surpasses the performance obtained by early stopping. Our method is easy to implement, and can be integrated with any training scheme and architecture, without additional prior knowledge beyond the training set. Accordingly, it is a practical and useful tool to overcome overfit.
Discovering fine-grained categories from coarsely labeled data is a practical and challenging task, which can bridge the gap between the demand for fine-grained analysis and the high annotation cost. Previous works mainly focus on instance-level discrimination to learn low-level features, but ignore semantic similarities between data, which may prevent these models learning compact cluster representations. In this paper, we propose Denoised Neighborhood Aggregation (DNA), a self-supervised framework that encodes semantic structures of data into the embedding space. Specifically, we retrieve k-nearest neighbors of a query as its positive keys to capture semantic similarities between data and then aggregate information from the neighbors to learn compact cluster representations, which can make fine-grained categories more separatable. However, the retrieved neighbors can be noisy and contain many false-positive keys, which can degrade the quality of learned embeddings. To cope with this challenge, we propose three principles to filter out these false neighbors for better representation learning. Furthermore, we theoretically justify that the learning objective of our framework is equivalent to a clustering loss, which can capture semantic similarities between data to form compact fine-grained clusters. Extensive experiments on three benchmark datasets show that our method can retrieve more accurate neighbors (21.31% accuracy improvement) and outperform state-of-the-art models by a large margin (average 9.96% improvement on three metrics). Our code and data are available at //github.com/Lackel/DNA.
Advancements in deep neural networks have allowed automatic speech recognition (ASR) systems to attain human parity on several publicly available clean speech datasets. However, even state-of-the-art ASR systems experience performance degradation when confronted with adverse conditions, as a well-trained acoustic model is sensitive to variations in the speech domain, e.g., background noise. Intuitively, humans address this issue by relying on their linguistic knowledge: the meaning of ambiguous spoken terms is usually inferred from contextual cues thereby reducing the dependency on the auditory system. Inspired by this observation, we introduce the first open-source benchmark to utilize external large language models (LLMs) for ASR error correction, where N-best decoding hypotheses provide informative elements for true transcription prediction. This approach is a paradigm shift from the traditional language model rescoring strategy that can only select one candidate hypothesis as the output transcription. The proposed benchmark contains a novel dataset, HyPoradise (HP), encompassing more than 334,000 pairs of N-best hypotheses and corresponding accurate transcriptions across prevalent speech domains. Given this dataset, we examine three types of error correction techniques based on LLMs with varying amounts of labeled hypotheses-transcription pairs, which gains a significant word error rate (WER) reduction. Experimental evidence demonstrates the proposed technique achieves a breakthrough by surpassing the upper bound of traditional re-ranking based methods. More surprisingly, LLM with reasonable prompt and its generative capability can even correct those tokens that are missing in N-best list. We make our results publicly accessible for reproducible pipelines with released pre-trained models, thus providing a new evaluation paradigm for ASR error correction with LLMs.
High-performance tensor programs are crucial to guarantee efficient execution of deep neural networks. However, obtaining performant tensor programs for different operators on various hardware platforms is notoriously challenging. Currently, deep learning systems rely on vendor-provided kernel libraries or various search strategies to get performant tensor programs. These approaches either require significant engineering effort to develop platform-specific optimization code or fall short of finding high-performance programs due to restricted search space and ineffective exploration strategy. We present Ansor, a tensor program generation framework for deep learning applications. Compared with existing search strategies, Ansor explores many more optimization combinations by sampling programs from a hierarchical representation of the search space. Ansor then fine-tunes the sampled programs with evolutionary search and a learned cost model to identify the best programs. Ansor can find high-performance programs that are outside the search space of existing state-of-the-art approaches. In addition, Ansor utilizes a task scheduler to simultaneously optimize multiple subgraphs in deep neural networks. We show that Ansor improves the execution performance of deep neural networks relative to the state-of-the-art on the Intel CPU, ARM CPU, and NVIDIA GPU by up to $3.8\times$, $2.6\times$, and $1.7\times$, respectively.
From clinical development of cancer therapies to investigations into partisan bias, adaptive sequential designs have become increasingly popular method for causal inference, as they offer the possibility of improved precision over their non-adaptive counterparts. However, even in simple settings (e.g. two treatments) the extent to which adaptive designs can improve precision is not sufficiently well understood. In this work, we study the problem of Adaptive Neyman Allocation in a design-based potential outcomes framework, where the experimenter seeks to construct an adaptive design which is nearly as efficient as the optimal (but infeasible) non-adaptive Neyman design, which has access to all potential outcomes. Motivated by connections to online optimization, we propose Neyman Ratio and Neyman Regret as two (equivalent) performance measures of adaptive designs for this problem. We present Clip-OGD, an adaptive design which achieves $\widetilde{O}(\sqrt{T})$ expected Neyman regret and thereby recovers the optimal Neyman variance in large samples. Finally, we construct a conservative variance estimator which facilitates the development of asymptotically valid confidence intervals. To complement our theoretical results, we conduct simulations using data from a microeconomic experiment.
Data augmentation has been proven effective for training high-accuracy convolutional neural network classifiers by preventing overfitting. However, building deep neural networks in real-world scenarios requires not only high accuracy on clean data but also robustness when data distributions shift. While prior methods have proposed that there is a trade-off between accuracy and robustness, we propose IPMix, a simple data augmentation approach to improve robustness without hurting clean accuracy. IPMix integrates three levels of data augmentation (image-level, patch-level, and pixel-level) into a coherent and label-preserving technique to increase the diversity of training data with limited computational overhead. To further improve the robustness, IPMix introduces structural complexity at different levels to generate more diverse images and adopts the random mixing method for multi-scale information fusion. Experiments demonstrate that IPMix outperforms state-of-the-art corruption robustness on CIFAR-C and ImageNet-C. In addition, we show that IPMix also significantly improves the other safety measures, including robustness to adversarial perturbations, calibration, prediction consistency, and anomaly detection, achieving state-of-the-art or comparable results on several benchmarks, including ImageNet-R, ImageNet-A, and ImageNet-O.
With increasing interest in adaptive clinical trial designs, challenges are present to drug supply chain management which may offset the benefit of adaptive designs. Thus, it is necessary to develop an optimization tool to facilitate the decision making and analysis of drug supply chain planning. The challenges include the uncertainty of maximum drug supply needed, the shifting of supply requirement, and rapid availability of new supply at decision points. In this paper, statistical simulations are designed to optimize the pre-study medication supply strategy and monitor ongoing drug supply using real-time data collected with the progress of study. Particle swarm algorithm is applied when performing optimization, where feature extraction is implemented to reduce dimensionality and save computational cost.
Estimating the counterfactual outcome of treatment is essential for decision-making in public health and clinical science, among others. Often, treatments are administered in a sequential, time-varying manner, leading to an exponentially increased number of possible counterfactual outcomes. Furthermore, in modern applications, the outcomes are high-dimensional and conventional average treatment effect estimation fails to capture disparities in individuals. To tackle these challenges, we propose a novel conditional generative framework capable of producing counterfactual samples under time-varying treatment, without the need for explicit density estimation. Our method carefully addresses the distribution mismatch between the observed and counterfactual distributions via a loss function based on inverse probability weighting. We present a thorough evaluation of our method using both synthetic and real-world data. Our results demonstrate that our method is capable of generating high-quality counterfactual samples and outperforms the state-of-the-art baselines.
Applying artificial intelligence techniques in medical imaging is one of the most promising areas in medicine. However, most of the recent success in this area highly relies on large amounts of carefully annotated data, whereas annotating medical images is a costly process. In this paper, we propose a novel method, called FocalMix, which, to the best of our knowledge, is the first to leverage recent advances in semi-supervised learning (SSL) for 3D medical image detection. We conducted extensive experiments on two widely used datasets for lung nodule detection, LUNA16 and NLST. Results show that our proposed SSL methods can achieve a substantial improvement of up to 17.3% over state-of-the-art supervised learning approaches with 400 unlabeled CT scans.
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